Tetranychus urticae (two-spotted spider mite): 107365582
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Entry
107365582 CDS
T04901
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107365582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tut03036
]
107365582
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107365582
REST complex
107365582
Heterochromatin formation proteins
Other heterochromatin formation proteins
107365582
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
YcaO_C
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
107365582
NCBI-ProteinID:
XP_015788601
LinkDB
All DBs
Position
Unknown
AA seq
1659 aa
AA seq
DB search
MRVRDMNSNRPSIGSWIGNPIQNPNLLQVPLPGPIQAPVQAPLSGQLTDPGSHTTVLTGP
NRNPGALHIQTIPARSSGQSLTVTPTDLNAPLRPNIEIIQEPIKTTLTVHTAPAHGHQVH
ISSTPQPHHNSSSISANPQSVAVASAVATSIGIGGAASTAGVSGDASNRTTTVSATSHQS
QQQFQRLKVEDALSYLDQVKFKFNNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSHLFQG
HNELIVGFNTFLPPGYKIEMQSNDQVNVSMPSSTSILIIHNSTSNSVTTNPQMLHLPSST
PSQNSVQASPHHPGVHLTTTNNLPGQMNKTIYSSPSSSTNYQHNPNISISSRSVSSDSHN
TTLSHSSVASQLTNVPATPPIAPSSRTVSMPVNVPPSASIVGSMGTGPGPGISGSGGGGG
GNNNSSNLSSSCAPGTGGDANSSSAQPVEFNHAINYVNKIKNRFQGQPEVYKQFLEILHA
YQKEQKCLKEGIKPDSKPLNESQVYAQVAKLFQNQEDLLQEFGQFLPDANAAAVSSSNSV
FPGVSQGVSSGLHHNSSAGSAISTAISAAHHVDNLAAAHRAATNDHGAIVKKPLARPGGT
VLGSNITTSMGIQIRRQQASVQSMNKPKMTSLRDVSLAEAGKYGSLNEYAYFDKVRKALR
SQEVYENFLRCLFLYNHEIVSRNELVLLVTPFLGKFPELLKYFKDFLGYKDGNSNANSYS
NFSMSSTNNNNMFMEGLSQRVVGIRERDRERLNQEGSGMEIDYATCKRYGASYRALPKNY
IQPECSGRTPLCKEVLNDTWVSFPSWSEDSTFVTSKKTQYEEFIYRCEDERFELDVVIET
NLSTIRVLEAVQKRLSRMTPDERNKFKLDDCLGGTSAIIHQRSIRRIYGDKAPEIIEGLK
KNPNIAVPLVLRRLKNKEEEWKEAQKQFNKIWREQSEKYYLKSLDHQGISFKQNDIKYLR
SKSLLNEIETFYEERHEQNEENIAAAGEGTGNNNNNGQNIASGPHMTLTYKNKAMIEEAC
NLIIHHVKRQTSIHKEDKQKIKQLLKHFIPDLFATQRGDLSDDELEDFEMDKKIDTFNDN
RPNKDNTSTICIPVNLPTVKDCKTKCDGDVTIVTSVNPLTTESGQCVNGNNSSGGQAKNV
NPMLNNDPDDSYALFFVNSYWYLFFRLHFILCDRLAQMHERAMILIAEEEKEKTLRKEST
AAALRLKPKIFLTDDYEVEEYFPALIDMVKQVLDGNLDFNQFEDQLREMFGIHAYIAFTL
DKVVQNIVRQLQHIVGDEACIQCTEMFVEESKNGATGGPCASHHLRANAEALYQKKAEQL
VGEENCYKIIIYKGEGKVTIELIVTDSVESEDGEVEKWSEYVEKYVKEVENEISDELKER
LSRKPVFLPRNIRMWRYKAKEKEERANELKGDLNSGLQVVDDTQCKFNVNSYKMVFVVQS
ESYLCKRNALTKARKTHKKVSRRLHAKFNQFHQNWVEKEVTNEQRDECEDWLMGHIYDDE
DEDVIMKSDGIEETPVEESPIENKTKLDSLDSLATGTTTTSTTSISTITTPTATTTIKPT
SSSLATIVTPIVVGSTAITITTTTLTTPVTTSTISTLPPPPPTTTTTTTATLITTVPPPP
SMPQKPANEPFKRKTRRLLFDNPNNRPYRPFCKYSTQCK
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttcgggatatgaattccaaccgaccgtctattggatcttggattggtaatcca
atacaaaatcctaatttacttcaagtaccattacctggtccaatacaagcgccagttcaa
gctccattgtcgggtcaattaactgatcctggttcccatacgaccgtgcttactggtcct
aatcgtaatcctggagctcttcatatacaaactatcccagctagatcatcaggtcagtct
ctgacagttaccccaactgatctaaatgctccattgagacccaacattgaaatcattcaa
gagccaataaagacaaccttaacagttcacaccgcaccagcccatggacatcaagtacat
atttcatcaacacctcaaccccatcataatagctcttcaatatcagctaatccccaatcg
gtagctgttgccagtgctgtagccacaagtattggaattggaggtgctgcatctactgct
ggtgtaagtggtgatgctagcaataggacaaccactgtttccgcaacgagccaccaatct
caacaacagtttcaaaggttaaaagtagaagatgctctatcttatttggatcaagttaaa
tttaaattcaataaccaacctcaagtttacaatgattttctggatataatgaaagaattt
aaatcacaaagtatagatactcctggagttattcaacgagtatctcatctgtttcagggt
cacaacgaacttattgtcggtttcaacacttttctaccacctggttacaaaattgaaatg
cagtcaaatgatcaagttaatgtcagcatgccatccagcaccagcatcctcatcattcat
aattcaacttctaactcagtcaccactaaccctcaaatgttgcatcttcccagttctaca
ccctctcaaaattcagtccaagcttctccacaccatcctggtgttcatttgaccaccacc
aataatttacctggtcaaatgaataaaaccatctactcttctccatcctcttcaacaaac
tatcaacacaatccaaatatctctatttcatccagatctgtttcgtctgattctcataat
acaactctctctcactcatctgtggcatcacaactaaccaacgttccggctactccacct
attgctccaagttcgcgaacagtatcaatgccagttaatgtaccaccatctgcaagtata
gtagggtctatgggaactggtcctggtccaggtatctcaggaagtggtggtggtggtggg
ggtaataacaatagttctaatctgagttcttcgtgtgcccctggcacaggtggagatgcc
aattctagtagtgctcaacctgtagagtttaatcatgctataaattacgtgaacaagata
aagaatcgtttccagggtcaaccagaagtttacaaacaatttttggagatcttacatgcc
tatcaaaaagagcaaaagtgtctaaaagaaggaatcaaacccgattcgaaacctctcaat
gaaagtcaagtttatgcacaagttgctaaactttttcaaaatcaagaagatcttcttcaa
gagtttggccaatttttacctgatgccaatgctgctgctgtaagctcaagtaactctgtt
tttcctggtgtctcccaaggtgttagttctggcttgcatcataactcatcagctggttct
gccatatctacagccatctctgcagctcatcatgttgacaatctcgctgccgctcaccgt
gcagctactaatgatcacggtgctattgtgaagaaacctttggctcgacccggtggaact
gttcttggatccaatatcactacatctatgggtattcaaataaggagacagcaggcgagt
gtacaatctatgaataagcccaagatgacctccttacgagatgtcagcttagccgaagct
ggaaaatatggtagcctaaatgaatatgcatattttgataaggtccgtaaagctctgaga
agtcaagaagtgtatgaaaactttttacgttgcttgtttctctataatcatgaaattgta
tctcgtaatgagctcgttttgttggtcacaccgtttttgggcaaatttcctgaattattg
aaatatttcaaagattttctgggctacaaagatggtaattccaatgcaaacagctattcc
aacttttctatgtcttctacaaataacaataatatgtttatggaaggattgtcgcagcga
gtggttggtatcagagaaagagatagagaaagattgaatcaagaagggtcaggtatggaa
attgattacgctacctgcaaaagatatggtgcatcatatcgagcattacccaaaaactat
attcaacccgagtgttctggtagaacaccattgtgtaaagaagttttaaatgatacttgg
gtatcatttccctcttggtctgaagattctacttttgttacttctaagaaaactcaatat
gaagaatttatttatcgttgtgaagatgaacgttttgagttggatgttgttattgaaact
aatttgtcgacgatccgagtattggaagctgttcaaaaaaggttaagtcgcatgacgcct
gatgaaagaaataaattcaagttagacgattgtcttggtggtacttcggccattattcat
caacgttccattcgaaggatttatggagataaagctcctgaaattattgaaggactgaaa
aagaacccgaatatagctgtacctctcgttttgaggcgattaaaaaacaaagaagaagaa
tggaaagaagctcagaaacaatttaacaagatttggcgcgagcaaagtgaaaaatattac
ctaaaatccctggatcatcaaggtatttcatttaagcagaatgacatcaaatatttgcgt
tccaaaagtttgttaaacgagattgagactttttatgaggaaaggcatgaacaaaatgag
gaaaacattgctgctgctggagaaggaactggcaataacaataataatggtcagaatatt
gcttctggacctcatatgacattaacttacaaaaacaaagccatgatcgaagaagcatgt
aatctaattatccaccacgtgaaaagacaaacctccattcacaaagaagataagcaaaaa
ataaagcagctattgaagcattttatacctgatctttttgccacccaaagaggagattta
agtgatgatgaattggaagactttgagatggacaaaaagattgacacttttaatgataat
cgacccaataaggataacacgagtaccatttgtataccagttaatcttcccactgttaaa
gattgtaaaactaaatgtgatggagatgttaccattgttacctcagtgaatccgttgact
accgagagtggacagtgtgttaatggtaataactctagtggtggtcaagctaaaaacgta
aatcctatgttgaataacgatcccgatgatagttatgcattattctttgtcaatagctat
tggtatctatttttccgacttcattttattttatgcgatcgattggctcaaatgcatgaa
agagccatgattttgattgcagaagaagaaaaagaaaaaactctgagaaaagaatcaact
gctgcagctctcagattgaaacctaaaattttcctcacagatgattacgaggtagaggag
tatttccctgctctcattgatatggtgaaacaagttttggatggtaatttggattttaat
caattcgaagatcaactaagagaaatgtttggaattcatgcctacatagctttcacttta
gataaagttgtacaaaatatagttaggcagttacaacatattgttggtgatgaagcatgt
attcagtgtaccgaaatgttcgtcgaagaaagcaaaaatggtgccaccggtggaccctgt
gcatctcatcatttacgtgctaatgcagaagcattgtatcaaaagaaggctgaacaactt
gttggagaagaaaactgttacaaaataattatctataaaggtgaaggtaaagttacaatt
gagttaattgtaacagattcagttgaaagcgaagatggtgaggttgaaaaatggtcggaa
tatgttgaaaaatatgttaaagaagtagaaaatgaaataagcgatgagcttaaagaaagg
ttatcccgtaaacctgtttttttaccccgaaatatccgcatgtggaggtacaaggctaaa
gagaaagaagaaagagctaatgaattaaaaggagatttgaacagtggtcttcaagttgtc
gatgatactcaatgtaaatttaatgtaaactcatataaaatggtttttgttgtacaaagt
gaaagttatctgtgcaaaagaaatgcattaacgaaagctcgtaagacacataaaaaagtt
tcgagaagacttcatgccaagtttaatcaatttcatcaaaattgggttgaaaaagaagtc
accaatgaacaacgagacgaatgtgaagactggttaatgggccatatctatgatgatgaa
gatgaagatgtaattatgaaaagtgatggaatcgaagagactccagtcgaggaaagtccg
attgaaaataaaacaaaattagatagtttagattcattagctacgggtacaacaacaaca
tcaactacatctatatcaacaataactactccaacagcaactacaacgattaagccaact
tcatcttctttggccactattgtaacaccaatagtagtaggaagtacagcaataacaatt
acgacaacaactttaacaacaccagtaacaacatcaacaatatcaacgttgccacctcca
ccaccaacaacaacaacaaccacaacagcaacattaataacgactgtacctccaccgcca
tcgatgccacaaaaaccggccaatgaaccatttaagagaaaaactcggcgcttactgttc
gataatccaaataacagaccttacagacccttttgtaaatattcaactcaatgtaaatag
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integrated database retrieval system
