Tetranychus urticae (two-spotted spider mite): 107365816
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Entry
107365816 CDS
T04901
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107365816
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107365816
Spliceosome [BR:
tut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107365816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
Ank_4
Ank_2
AAA_22
Ank
AAA_19
ATPase
nSTAND3
ResIII
AAA_16
NPHP3_N
ATPase_2
Ank_5
AAA_7
Ank_3
T2SSE
Cas3-like_C_2
Antifungal_pept
Motif
Other DBs
NCBI-GeneID:
107365816
NCBI-ProteinID:
XP_015788872
UniProt:
T1KNB5
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSCLIGRLTDGIPQIPPPAKDNQLTQFRRSLPIWKLRNDIMSLVENNSVILVSGDTGCGK
TTQVPQFILDHCLKTKHVCRIVVAEPRRLSALSVAARVAQERGEAVGLTVGYQIRLESKV
SPKTLVTFCTNGVLLRTLMRGDSALDRVTHIIIDEVHERDRFADFLLLTLRNLLDRKRNL
KLILMSATIDSARFSQYFDGCASITIPRISHEVKTFFLEDILRKTDYLNSQIVSQHIVSK
SKKQKKRLQKFLQAFSSYNSVNLPEAILNQSAPAMESKEFAFDLFDDFLEKAFRDGSDEI
FEELLSLIINDGYPIDYQHSETGLTSLMVCCARGKLSYVEVLLGLGANVDLKSHNSWVAF
DFAQQFNHIEICELLHAYINYRNRKALEDNNKFDYCSFMLSITEADKKIASLYNTLFPTD
DVDLNLIIEVISLISKSDNDAFKSSRGAILIFLPGYDEIIGLRDRIANDHRLNHSNFQIF
MLHSQMQNSDQRKVFDPVKPGVRKIILSTNLAETSITIDDVVFVIDSGKVKEESYDVNLG
TTMLKSTWVSQANAIQRRGRAGRCQSGYCYHLFSKSQFLNMPRFQVPQILRMPIHELCLQ
TKLLAPKGVSIIDFLSQALDPPPMATLKSSINLLKTIDALDKDEQLTEIGFHLLDLPLVP
TLGKMVLNAIVLKCLDPVLTIVCTLAYRDPFYIPNDRGLKPAAVKAKAKLASETYSDHMV
LLRVFQAWQKARQDGFEYEFANANFVRSATMEMIAGTRAQLLGQLRASGFIRARGPGDIR
DLNINSDHWGVIKAALCAGAYPNILKVDLSKKNLISNKDSSIRFHPSSVLIETSENRPKN
HVKLLESLPSEWLIFDSLSRIGFKSYARYCTLISPLTVALFAGTSKSDNVVESITSKKSN
RKKSSSRDLEREQSGDQILKIDDWILFRLKASDSNIVRLRKKWHSLFLRRISSPNKPSTN
SDDHIIKTLVDLITQAEKSHRLTQPNGIGQRPRPMTIPIY
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtctaatcggacgattaactgatggtataccgcaaattcctccgccagcgaaa
gacaaccaattaacccagtttaggagatcattaccaatatggaaactacgtaatgatatt
atgtcccttgttgaaaataattcagttatcttggttagtggggatactggatgtggaaag
acaactcaagtgccgcaatttattctggatcactgcctcaagactaaacatgtatgtcgt
attgtcgtcgccgaacctcgtcgattgtctgcattatccgttgctgctcgagttgctcaa
gagcgtggagaagctgttggactaactgttggctatcaaatacgactggaaagcaaggtt
tctccaaagacattggtcactttctgtaccaatggtgtgcttcttcgtaccctaatgaga
ggtgatagcgctttagaccgcgtaactcatattattattgacgaagtccatgagagagat
aggtttgctgatttcctacttttgactcttcgtaatcttttggatcgcaaacgaaattta
aaattaatcctgatgtcagctacaattgatagtgctcgcttctctcaatatttcgatggc
tgcgcttcgataacgattccaagaatctctcacgaagtaaaaacattttttcttgaagat
atactccgtaaaactgactacttaaacagtcaaattgtctcacaacatatcgtatccaag
tctaaaaaacagaagaaacgactacaaaaatttcttcaagccttttcaagctacaattct
gtcaatttaccagaagctatattaaatcaaagtgctccagctatggaaagcaaagaattc
gctttcgatttgtttgatgattttttggaaaaagcatttagagatggtagcgatgaaatt
tttgaggaacttctcagtcttataatcaatgatggctatcctatcgattatcaacattca
gaaactggtctcacctccttgatggtttgctgtgctcgtggtaaactttcatatgttgag
gttcttttgggcttaggtgccaatgttgatctcaaatcacataactcttgggttgcattt
gatttcgcccaacagttcaatcatatcgagatctgtgaattattgcatgcttatataaat
tacaggaaccgtaaagccttagaagataacaataaatttgattattgcagtttcatgctg
agcatcactgaggcagataaaaagatagccagcttatataatactctcttcccaactgac
gacgttgatttaaacttgatcatagaagtgatctctctcatttcaaagtccgataatgat
gctttcaaatcttcaagaggtgccattctgatttttttacctggttacgatgaaataatt
ggacttcgggatagaattgcaaatgatcaccgtttgaatcattcaaattttcaaatattt
atgttgcactcacaaatgcaaaactctgaccaaagaaaagtttttgatccggttaaacct
ggagttcgaaagattattttatccactaacctcgctgaaaccagtattactattgatgat
gtcgtttttgtgattgactccggcaaagttaaagaagaatcttatgatgtgaatctcggt
accacaatgctcaaatcaacctgggtatcacaagctaatgcaattcagaggcgcggacga
gccggtcgttgtcaaagtggttactgttatcatcttttcagtaaatctcaatttctcaat
atgcctcgttttcaagtgccacaaatccttcgcatgcctattcatgaattatgcctacaa
acgaaacttttagctcctaaaggcgtttctattattgattttttgagccaagcacttgat
ccaccaccaatggctacattgaaaagctctataaatttacttaagactatcgatgctttg
gacaaagatgagcagctaactgaaatcggattccatcttctagaccttcctcttgtccct
actcttggaaaaatggttctcaacgctattgtattaaaatgcttggatccagttttaacc
attgtctgcactttagcttatcgtgatccattttacattccaaatgatcgaggtcttaaa
cctgctgcagtgaaagccaaggctaaattggcaagcgaaacctactctgaccatatggtc
ttgttgcgagtatttcaagcatggcaaaaagctcgtcaagatggtttcgaatatgaattt
gccaatgccaatttcgttagatcagctacaatggagatgattgctggaactcgagctcaa
ctactcggtcaacttcgggcttccggctttattcgtgctcgtggacctggagacattcgt
gatctcaatataaattcagatcattggggagttatcaaagctgcgctctgtgctggtgct
taccctaatattttaaaagttgatctgagcaagaaaaacttaatatctaacaaagattcc
tctatcaggttccatccatcatccgttttaattgaaacctcagaaaaccgtcctaagaat
catgttaaattgcttgaatctctgccatccgaatggttaatttttgattccttatctcgc
attggattcaaatcatatgcacgttattgtactctaatcagtcctcttactgttgcctta
tttgctggaacctccaaatctgataacgttgttgaatctattacttccaaaaaatctaat
cgcaaaaaatcttctagtcgtgatttggaaagggaacaatcaggggatcaaatcctcaaa
attgatgattggatcttattcagactcaaagcaagcgattccaatattgttcgtcttcgt
aaaaagtggcactcgttattccttcgtcgaattagttcgccaaacaagccttccactaat
tccgatgatcacataatcaaaacacttgttgatttaattactcaagcagagaaatcgcac
agattgactcaaccaaatggcattggacaacgtccaagaccaatgactattccaatctac
taa
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