Tetranychus urticae (two-spotted spider mite): 107366119
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Entry
107366119 CDS
T04901
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03022
Basal transcription factors
tut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107366119
09124 Replication and repair
03420 Nucleotide excision repair
107366119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107366119
03400 DNA repair and recombination proteins [BR:
tut03400
]
107366119
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107366119
DNA repair and recombination proteins [BR:
tut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107366119
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
Motif
Other DBs
NCBI-GeneID:
107366119
NCBI-ProteinID:
XP_015789173
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MERIDLDDDQKGYRWETEYEKTWEAIRENEEGLLQPSVNDMIHRAKRKRLTDRKNVRLGM
MRHLYIVIDMSQAMVEVDLKPTRIYCTLKILQLFLNDFFDQNPISQIGIIVTRNKRGEKM
VESTGNHKALMDTVNKLMDVSCVGEPSLQNALEICLHSLKHLPAHTSKEVLVIFGSLTTC
DPSDINETIEALVKYNIRASVIGLAAEVKICQKLAKSTKGTYDVILDENHCKDLIFEHLN
PPPATANSESSLIKMGFPPYMNDGEGKPAMCVCHLSTSVNFSTSGYFCPQCESKYCDLPV
ECQTCGLTLVSSTHLSRSYHHLFPVDLFNEMDFENGEKCFACQLELTKGSQCSHCQNFFC
IECDLFVHENMHLCPGCASKPGTHR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaattgatttagacgacgatcaaaaaggttaccgctgggaaaccgaatatgaa
aagacatgggaagcgattcgtgaaaatgaagaaggactgctccagccttctgtcaatgat
atgattcaccgagccaaaagaaagcgacttaccgatcgtaaaaatgttcgtcttggaatg
atgagacatctttacattgtcatagatatgtctcaagcaatggttgaagttgacttgaag
ccaacacgaatttattgtactttgaagatattacaattatttctcaatgattttttcgat
caaaatccaataagtcaaattggaatcatcgtgacacggaataaaagaggtgaaaaaatg
gttgaatctactggtaatcataaagcattaatggacactgtcaataaactaatggacgta
agctgtgttggcgaaccatcactccaaaatgctctggagatttgtttacattcattaaaa
catcttccagctcatacaagtaaagaagttttggtcattttcggctcattaacaacctgt
gatccatctgatattaacgagacaatcgaagcattggtcaaatataatataagggcttca
gtaattggtttagccgccgaagtcaaaatttgtcaaaaactagctaaatctactaaagga
acttatgatgttatcctggatgaaaatcattgtaaagacttaatattcgagcatcttaat
cctcccccagccactgcaaactctgaatcatctttaattaaaatgggatttcctccttat
atgaatgatggagagggtaaaccggcaatgtgtgtttgtcatctctctacaagcgtcaat
ttctcaacatcaggctacttttgtcctcaatgtgaatctaaatattgtgatcttcccgtt
gaatgtcaaacatgtggtctaacattagtttcatcaactcatctttcacgatcttatcat
cacttgttccctgttgatctttttaacgaaatggattttgaaaatggcgaaaaatgtttc
gcatgtcaattagagttaaccaaaggttctcagtgtagtcattgtcaaaattttttctgc
attgaatgtgatctttttgttcacgagaatatgcacctttgtcctggttgtgccagtaaa
ccaggtacacacagataa
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