KEGG   Tetranychus urticae (two-spotted spider mite): 107366457
Entry
107366457         CDS       T04901                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107366457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tut03041]
    107366457
Spliceosome [BR:tut03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    107366457
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd PRP4 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_Vps41 eIF2A WD40_RFWD3
Other DBs
NCBI-GeneID: 107366457
NCBI-ProteinID: XP_015789553
UniProt: T1KQK9
LinkDB
Position
Unknown
AA seq 470 aa
MSINVSTEYMEIEEDSASRRLVLEEFERRKKGRQIPVSVDDAEVKSQLRQLNQPICIFGE
GPADRRERLRQLLTRLGEDAIKKTKDEEKVDEKERDPNTTWYHEGPNSLKAARIWLAEYS
IVRARERLERARKTKSMPETTRNNLNQELYKKLHTFEIECSQVGDARPLSFCRFSPDSMM
IATASWSGQCKLWSRVSLDLRKTFRGHNGRACSIVFHPKATISQSPTALNLASSGIDGSV
CLWSMENEFSLRNLDGHQPHRVSRVSFHPSGRFLGTCCDDRSWRLWDLEVNEEILFQEGH
SKGVYDIDFHPDGSLAATGGLDAFGRVWDLRTGRCIMFMEGHLKGITSVSISPNGYQVIT
GSMDNTVKIWNLRQRRCEYTIAAHNNIVSGVQFEKDQGRFIVSSSYDNSIKVWAHPNWTR
IAELNGHDNKVMGIDIAADNHSILSCSFDRTFKLWSQSWQPKSSTQNKDN
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtctattaatgtgtcaacagagtatatggaaatcgaggaggactcagcaagtcggaga
ttggtcctggaagaatttgaaagaagaaagaaaggccggcaaatacctgttagcgttgat
gatgcggaagttaaatcacaacttcgacaattaaaccaaccaatttgtatctttggagaa
ggaccggcagacaggagagaaagattaagacagttgctgacaagactcggagaagatgcg
atcaagaaaacgaaagatgaggaaaaagtagatgaaaaggagcgagatccaaacacaact
tggtatcacgaaggtcctaatagcctgaaggcagctagaatctggttggctgaatattcc
attgtgagagcccgggaaaggctggaacgagctcgtaaaacaaaatcaatgcctgagacc
accagaaataaccttaatcaagagctttataaaaaattacatactttcgagattgaatgc
agtcaggttggtgacgcaagaccactgtccttttgcagattcagtcctgattcgatgatg
attgcaactgcatcctggagtggacaatgcaaactgtggtcgcgagtttcgctagatctc
aggaaaacttttcgtggtcataatgggcgagcttgctcgatcgtgtttcatccgaaagca
acaatttctcaatcaccaactgctcttaatttagcatcaagtggcatcgatggatctgtg
tgtttatggagcatggagaatgaatttagtcttagaaacttggatggacaccaacctcat
cgcgtaagtcgagtatctttccatccctcaggccgttttttgggaacctgttgtgatgac
agatcttggcgactctgggatctggaagtcaatgaggagattctttttcaagaaggccat
agtaaaggtgtttatgacattgattttcaccctgatggatcgttagctgcaactggtggt
ttagatgcttttggcagagtttgggatctgagaacaggtcgttgcataatgttcatggaa
ggacacttgaaaggaataaccagtgtctcaatttcaccaaacggctatcaagttataacg
ggaagcatggacaatactgtaaaaatttggaatcttaggcaacgaagatgcgaatacaca
atcgccgcacacaacaacatcgtgtctggagtccaatttgaaaaggaccaggggcgattc
atcgttagttctagttatgataatagtataaaagtctgggctcatcctaattggacccga
atcgctgaattaaatggccacgacaacaaagtaatgggtatcgacatcgccgccgacaat
cacagcatactttcgtgctcattcgatcgaacgttcaaactttggagtcaatcctggcag
cccaaatcatcaacacaaaacaaagacaattaa

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