Tetranychus urticae (two-spotted spider mite): 107366457
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Entry
107366457 CDS
T04901
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107366457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107366457
Spliceosome [BR:
tut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107366457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
107366457
NCBI-ProteinID:
XP_015789553
UniProt:
T1KQK9
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MSINVSTEYMEIEEDSASRRLVLEEFERRKKGRQIPVSVDDAEVKSQLRQLNQPICIFGE
GPADRRERLRQLLTRLGEDAIKKTKDEEKVDEKERDPNTTWYHEGPNSLKAARIWLAEYS
IVRARERLERARKTKSMPETTRNNLNQELYKKLHTFEIECSQVGDARPLSFCRFSPDSMM
IATASWSGQCKLWSRVSLDLRKTFRGHNGRACSIVFHPKATISQSPTALNLASSGIDGSV
CLWSMENEFSLRNLDGHQPHRVSRVSFHPSGRFLGTCCDDRSWRLWDLEVNEEILFQEGH
SKGVYDIDFHPDGSLAATGGLDAFGRVWDLRTGRCIMFMEGHLKGITSVSISPNGYQVIT
GSMDNTVKIWNLRQRRCEYTIAAHNNIVSGVQFEKDQGRFIVSSSYDNSIKVWAHPNWTR
IAELNGHDNKVMGIDIAADNHSILSCSFDRTFKLWSQSWQPKSSTQNKDN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaatgtgtcaacagagtatatggaaatcgaggaggactcagcaagtcggaga
ttggtcctggaagaatttgaaagaagaaagaaaggccggcaaatacctgttagcgttgat
gatgcggaagttaaatcacaacttcgacaattaaaccaaccaatttgtatctttggagaa
ggaccggcagacaggagagaaagattaagacagttgctgacaagactcggagaagatgcg
atcaagaaaacgaaagatgaggaaaaagtagatgaaaaggagcgagatccaaacacaact
tggtatcacgaaggtcctaatagcctgaaggcagctagaatctggttggctgaatattcc
attgtgagagcccgggaaaggctggaacgagctcgtaaaacaaaatcaatgcctgagacc
accagaaataaccttaatcaagagctttataaaaaattacatactttcgagattgaatgc
agtcaggttggtgacgcaagaccactgtccttttgcagattcagtcctgattcgatgatg
attgcaactgcatcctggagtggacaatgcaaactgtggtcgcgagtttcgctagatctc
aggaaaacttttcgtggtcataatgggcgagcttgctcgatcgtgtttcatccgaaagca
acaatttctcaatcaccaactgctcttaatttagcatcaagtggcatcgatggatctgtg
tgtttatggagcatggagaatgaatttagtcttagaaacttggatggacaccaacctcat
cgcgtaagtcgagtatctttccatccctcaggccgttttttgggaacctgttgtgatgac
agatcttggcgactctgggatctggaagtcaatgaggagattctttttcaagaaggccat
agtaaaggtgtttatgacattgattttcaccctgatggatcgttagctgcaactggtggt
ttagatgcttttggcagagtttgggatctgagaacaggtcgttgcataatgttcatggaa
ggacacttgaaaggaataaccagtgtctcaatttcaccaaacggctatcaagttataacg
ggaagcatggacaatactgtaaaaatttggaatcttaggcaacgaagatgcgaatacaca
atcgccgcacacaacaacatcgtgtctggagtccaatttgaaaaggaccaggggcgattc
atcgttagttctagttatgataatagtataaaagtctgggctcatcctaattggacccga
atcgctgaattaaatggccacgacaacaaagtaatgggtatcgacatcgccgccgacaat
cacagcatactttcgtgctcattcgatcgaacgttcaaactttggagtcaatcctggcag
cccaaatcatcaacacaaaacaaagacaattaa
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