Tetranychus urticae (two-spotted spider mite): 107366715
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Entry
107366715 CDS
T04901
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tut03036
]
107366715
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107366715
microRNA pathway
RISC loading complex
107366715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Dicer_dimer
Ribonucleas_3_3
PAZ
Helicase_C
dsrm
Motif
Other DBs
NCBI-GeneID:
107366715
NCBI-ProteinID:
XP_015789823
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MDLYEEVKKKNTVAFFGNDVYRRFISLCVINRFGYQIRKKNGQVRRSFILVSDVNQVHLE
AQTIRNHTDLGVAEFSSDDIQFDKESWTEQFIANHVFVMSCSLFSTLLSPPLISLSSINL
IILNDCHLVLRDESYKKVSSFLQSVDPSITRVLAFAPSLMKHHQKPAVIEAIITKMERLL
RATRNTVADVRISFRFPVKPKGKVIYYDDYPISFDLYNADQISQLLTDLNTLIVGCQEVF
VSEPGINGQTLLKTLRQFFSTIKTMGPFCAMELAEIYAKEVAELVVNSRDFRCAAVTSTL
ITFFQYVQVTLRHQLSLLHPNQQLQTNVPEKMLSILKVLLDFVPDPEATQSESVKHHSGL
NGIIFVEDRTTIRLLAAWLRSVSLIIDCFNFLKVDYLVRDNKLLYSSDPKDNIPSTSRFE
STMYKYRKHEINLLIVSSCFEEELDVSKCNLVIRYDFPETFSQYLHSKAKLRTDYGKYVL
FIPKNEPSKSQFEQKLRELLSMENIIKDKELEVQGPPPYDTLADLYPAYTTSKDISVDLS
NSLNVLYRYCARLPSDTFTRLVPIYMYEQLEDGQIKCTVYLPTNSPVRDPISGLPAKHQE
IAQRSAAIECCKALHQAGELNDYLFPVGKENNKCLEELGIKRHKRGPRGAEEEQERPGTT
KRRQSYQKKIAEALRGKDIAPGEPCFMYIFLMSLTCPIPEEQNTRGRKLIDPMDSPRFFG
LLTHSRISRICDFPVYTRSGEVIVSMKWAAENVTFNSDEIEKIKRFHRFTFTDVLHLVKD
PMVYEPAEAPSSVLVLPVNYAASSSKEIPASFTIDSDSVTIDWGFIDRVLFYEQADTSER
KANFKFNHSVFEDAVVKPWYRTANEQLHFYVANICENLKPTSQFPTEAFPTFYDYYLQKY
KIQITDKDQPLLDVDHTSARLNFLTPRFVNRKGMPLPKSTEKTRAAKRENLESKQLLIPE
LCIVHPFSASYWNKAVCLPSILYRVNHLLIADQLRRQVALDIGIGVTKDDPEFSWPTLDF
GWSLTEVLNQSFEEKDDDEYDINVSSPKTLEVKPSKKNKPSPSSAAPLPPKISSPPAPVE
VKNISTESTQNKDGCDDLLIDTFDPNIYKVVDAEVDDDLGDIPPVGNWDQNSQEFNQPFE
ISAISPIINWPGLDDEPRVVELSDDNKPIKRKKNQRMGSPSNFDRIGENKNWDIKESDLN
SVIDLDIPGLNLISTAVGVDLHKLSKDLEDIHAFDDFDDSEDEDELGSYEEEADSHLDAD
QLLIPDSDGAVSAVKANISRDILSSGLLLSYQSEPAKVSEESSYYDEIEIPSDDMITAVE
LDKEKVESIFVADEIIVPDKDANCDTIDKTIDKIADKLEEALKLVDPVTVLPNIEEKDSH
VKASDIAMNLEEGKASPSFGELLPNRDEFVLNADNNGDSVLTCIHLDPLNEEFDPEIGPS
PAMVLQALTMSNASDGINLERLETVGDSFLKYAVTVFMYCRCPDQHEGILSQLRSTQISN
LKLYELGSQKNLGELMVATKFEPSDNWLPPGFKIPEKCLIGSPSTSNDEKLISFNCLLTQ
QSIPDKSIADCVEALIGSFLISCGPRGALLFMKWLGLMVMDNVEEPQEESGLWRWLNPIK
PPLFPNAPKIELDNLYFSHGLDRFEKEIIQYEFKDKAYLVQAFTHNSFSDNRVTDCYQRL
EFLGDAVLDFLITRHLFDDPRQHSPGVLTDLRSALANNTFFASLAVEYEFHKYLMYKTAD
LHKVISKFVEFHGNSNGKIKDPAAFALLIGEADCEQREDIEVPKALGDVFESVAGAIFLD
SGFSLDTVWRVYYRMMRPEMEYYSKNPPKSPIRELLEMKPQKVSFSKPDTVNINGVPKVK
ISVEVFNIGKYYGIGRNRRLAKYTAAKRALRDLKSSNNSLN
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggatctctatgaagaggttaaaaagaaaaacacggtggcgttctttggaaatgacgtt
taccgacgcttcatttctctttgtgtcatcaatcgctttggttatcagattcgtaagaaa
aatggccaagttagacggagctttattcttgtctctgatgttaatcaagtgcacctggaa
gcacaaactatcaggaatcacactgatttgggcgttgccgaattctcaagtgatgatatt
cagtttgataaagaatcatggactgaacaatttatagctaatcatgtctttgtaatgagt
tgctctcttttttcaactcttctttctccacctctgatttcactttcctcgattaatttg
atcatactgaatgattgccacttagttttgcgagatgaaagctataagaaggtttcttca
tttctacagtccgtggacccttcgataactcgtgtgttggcgtttgctcctagtcttatg
aaacatcaccaaaagccagctgtaatagaagcaataattactaaaatggagagattatta
cgggcaactagaaatactgtcgctgatgtaagaatttcctttcgttttccagttaaacca
aaaggaaaagtaatttattacgatgattatcctatctctttcgacctttacaacgctgat
caaattagtcaacttttgacagacttgaataccttaattgttggctgtcaagaagttttt
gtttctgagcctggaataaatggacaaactctattaaagactcttagacaatttttctcc
actattaagacaatgggacctttttgtgctatggaattagctgaaatttacgccaaagaa
gttgcagagcttgttgttaattcacgagattttcgatgtgctgctgtaacttcaacctta
atcaccttttttcagtatgttcaagtcacattacgacaccaattatctctacttcatcca
aaccaacaacttcaaaccaatgtacctgagaaaatgctatccattctcaaagttctctta
gactttgtcccagatccggaagctacacaatcagagtcggtaaaacatcattctggtctt
aatggtattatttttgtagaagatcgaacaacgattcgacttttagctgcatggctgcgc
tcagtttctttaattattgattgtttcaattttctcaaagtggattatttggttcgtgat
aataagctcttatatagctccgatccaaaggataatattccgtctacttctcggtttgaa
agtacgatgtataagtatcgcaagcatgaaataaatttgctcatagtctcaagctgtttc
gaggaggaactcgatgtatctaaatgtaacttggtaattaggtatgattttccagaaaca
ttttcccagtatctccacagcaaagcaaaactgcgaactgattacggtaaatatgtcctt
ttcattccaaaaaatgagccctctaagtcacaattcgaacaaaagttacgtgaattgtta
tctatggaaaacatcattaaagacaaagaattagaagttcagggacccccgccatatgat
actctggctgatctttatccagcttacactactagtaaagatatcagtgtcgacttgtcc
aattcattaaatgtcctttatcgatattgtgcgcgattaccaagtgacaccttcactcga
ttggtccctatttacatgtatgagcaattagaggatggacaaattaaatgtacagtttat
ctcccaaccaactctcctgttcgagatccaatatctggcttaccagcgaaacatcaagaa
attgctcaaagatcagctgctatcgaatgctgtaaagcactccatcaagctggtgaactc
aatgactacctatttccagtaggtaaagaaaacaataaatgccttgaagaattaggtatc
aagcgtcacaaacgtggtcctcgtggcgcagaagaagagcaagaaagacctggaacaaca
aaacgaaggcaaagttatcagaagaaaatagctgaagcgttaagaggaaaagatattgct
cctggtgaaccttgtttcatgtacatatttctaatgtcattaacttgtccgattcctgaa
gaacaaaatactcgtggaagaaaattaatcgatcctatggattctccacgattttttggt
cttcttactcactctagaatatctagaatttgtgattttcctgtttatacaagatctgga
gaagttattgtatcaatgaaatgggctgcagaaaatgtaacgtttaattcagatgaaatt
gaaaaaatcaaaaggttccatcgattcactttcactgatgtccttcatctggtcaaagat
ccaatggtttacgaaccagctgaagctccttcttcagttcttgttttgccagttaattac
gcagcgagttcatccaaagaaatccctgcttcatttacaatcgactccgatagtgttaca
attgattggggatttattgatagagtccttttttacgagcaagctgatacaagtgaaaga
aaggctaatttcaagtttaatcactctgttttcgaggacgctgttgtcaaaccttggtac
agaacagcaaatgaacaattgcatttttatgttgccaatatttgtgaaaatttaaaacca
acaagtcagtttcccaccgaagcatttcctacattttatgattattatttacagaagtac
aagattcaaattacagataaagatcaacctcttttagatgttgatcatacttctgcacgc
ctcaattttcttacaccaagatttgtaaatcggaaaggaatgcctttgcctaaaagtact
gagaaaactcgtgcggccaaaagagaaaaccttgaatctaaacaacttcttattcctgaa
ctgtgcattgttcatccattttcagcttcctattggaataaagctgtgtgtcttcctagt
attttatatcgagtcaatcatcttcttattgctgatcaattaaggcgacaagttgcccta
gacattggtattggagtaactaaagatgatccagaattttcatggcctactcttgacttt
ggatggagtttaactgaagtgttgaaccaatcttttgaggagaaagatgatgatgaatat
gatataaatgtttcaagtcctaaaactctggaagtcaaaccatcgaaaaaaaataaacca
agtccttcatcagcagccccgttgccacctaaaatttcttcacctcctgcgcctgttgag
gttaaaaatatctctacagagtctacacaaaataaagatggttgtgatgatttattaatc
gataccttcgatcctaacatttacaaagttgtcgatgctgaagttgatgatgacttagga
gatattcctcctgttggtaattgggatcagaatagtcaagaatttaatcaaccatttgaa
attagtgccatcagtccaatcatcaattggccaggacttgatgatgaacctagagttgtt
gagttgtccgatgataataaacccataaagcgcaagaaaaatcagcggatgggatcgcca
agtaattttgaccgcatcggtgaaaataaaaattgggatattaaagaatccgatcttaat
tcagttattgatctcgatattcctggattgaatttgatctctacagctgttggagttgat
ctccataagttatctaaagatttagaagatattcatgcattcgatgattttgatgattca
gaagatgaagatgaattaggtagttatgaagaggaagcggactctcatcttgatgcggac
caattattaattcccgattccgatggagcggtcagtgctgtcaaagcgaacatatctaga
gacattttgtcttctggccttcttttatcttatcaaagtgaacctgcaaaagtttcagag
gaatcttcttattacgatgaaatcgaaattccaagtgatgatatgataactgcagttgaa
ttggataaagaaaaggttgaatctatttttgtagctgatgaaatcatcgttcctgataaa
gatgctaattgtgataccattgataaaactatcgacaaaatcgctgacaaacttgaagag
gctctcaaactcgtcgaccctgtgactgttcttcccaacatcgaggaaaaagattcacat
gttaaagccagtgatattgccatgaaccttgaagaaggaaaagctagccctagttttgga
gaattacttccaaacagagatgaattcgttttgaatgctgataataacggagattctgtt
ttgacctgtattcatctcgatccattaaatgaggaatttgatccggaaattggcccaagt
ccagctatggtcttacaagcattgacaatgtcaaatgctagtgatggaatcaatttagaa
cgtcttgaaactgtcggtgattcttttcttaaatacgccgttactgtgttcatgtactgt
cgctgtccagatcaacatgaagggattttatctcaactcagaagtactcaaatcagtaat
ttaaaattatacgaattaggatctcaaaaaaatctcggcgaactaatggttgccacaaaa
ttcgaacccagtgataattggttaccacctggttttaaaattcctgaaaaatgtttaatt
ggatctccaagcacaagtaatgatgaaaaattaatatcatttaattgtcttttaactcaa
caatcaataccagataaaagtattgctgattgtgtcgaagctttaattggatcattcctc
atctcatgtggtccaagaggagctcttcttttcatgaaatggttgggtttaatggtcatg
gataatgttgaagagccacaagaagaaagtggactctggcgatggctgaatcctataaag
ccgcctctttttccaaatgcacctaaaattgaacttgataatctatacttttcgcatgga
ttggatcgctttgaaaaagaaataattcaatacgagtttaaagataaagcctatttagtt
caagcatttactcataattcattttctgacaatcgagttactgactgttatcaacgtcta
gagtttttaggtgatgctgttcttgattttctgatcacaagacacttgtttgatgaccct
aggcaacactcacctggcgtgttaacagatttaagatcggcattggcaaataataccttt
tttgcttccctcgcagtcgaatatgaatttcataaatatttaatgtataaaactgccgac
ttgcataaagttatttctaagtttgtcgaatttcatggaaattcaaatggaaaaatcaag
gatccagcggcttttgcgctgctgataggagaagctgattgtgaacagcgcgaagatatt
gaagttcctaaagctttaggtgacgtcttcgaatcagtagctggagcaattttcctagac
agtggattttctttggacaccgtttggagagtttactatcgaatgatgagacctgaaatg
gagtattatagtaaaaatccaccaaaatcacctattcgtgaacttctcgagatgaaacca
cagaaagtttcattcagtaaaccagatacagtcaatataaatggagtgcccaaggtcaaa
atcagtgtcgaagtgtttaacattggtaaatattatggcatcggacgtaatagacgatta
gctaagtacacagccgctaaacgagctttacgtgatttgaaatcatcaaacaattctctc
aactaa
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