Tetranychus urticae (two-spotted spider mite): 107366783
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Entry
107366783 CDS
T04901
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like isoform X2
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107366783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107366783
Enzymes [BR:
tut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107366783
Spliceosome [BR:
tut03041
]
Complex C
Other components
Step II factors
107366783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
TssR_VWA
T2SSE
SRP54
ResIII
ATPase
AAA_30
AAA_16
AAA_23
PhoH
AAA_14
AAA_7
ABC_tran
NB-ARC
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
107366783
NCBI-ProteinID:
XP_015789905
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MGDHHRPSSSHSHKSSVSDEYLARKREKEERERRRKLKGMYLENREKKLEPKRRKWEDDY
EVDEEYAKSWETSPRSTRSSTPSSRSHRSYTPRPGSTPRPGSTPRPGSSRHGSVAGTPRV
PYSYWENPSMRREEVDEDPELMKELDRRWYDDLADVKPFDDMPEEYVIKKEEALKKSRVQ
RISAQRRQIQKDNEKWENNRLLLSGVMKQTDEELEDTSEEERVHLIVHNIVPPFLDGRIV
FTKQFEPVIPVKDGTSNIAICAKKGSALTRYHREMKERKKAQKKEWELAGTRIGDIMGIK
KEKEDPKNNSETDYRTEHRFGDHLDNKLTDREKIRRQRQMLPVFAVRSALMNVIRENNII
VIVGETGSGKTTQLTQYLHEEGYTSYGMIGCTQPRRVAAMSVAKRVSDEMGVKLGEEVGY
SIRFEDRTSKKTIIKYMTDGILLRESLSDPDLDNYSAIIMDEAHERSLNTDVLFGILREV
AAKRIDLKLIVTSATMDSSKFALFFGNVPVFTIPGRTFPVDVLHSKNVVEDYVDQAIKKA
IEIHLSMPPGDILIFMPGQEDIDVTCEAITERLKDLEDTSKPPPLSILPIYSQLPSDLQA
KIFQKSEDDVRKCVVATNIAETSLTIDGIKYVIDSGFCKLKVYNPKIGMDALQIYPISQA
NANQRSGRAGRTGPGQCFRLYTEDQYRHELLTTSVPEIQRTNLANVILLLKSLGVQDLLE
FHFMDPPPQDNMLNSMYQLWILGALDNVGNLTPLGRNMVEFPLDPAMSKMLLISTEMGCS
EEMMTIVSMLSVQSIIYRPKGREEESDSVREKFHVPESDHLTLLNIYQFWEREQNKSSWC
KEHFIHMKSMKKVREVRQQLRDIMKSLKLPIISSGNEWDCIRKCIASAYFHQAARLKGIG
EYVNMRNGIPCHLHPTSSLYGMGFTPDYVVYHELLMTSKEYMHTVTAVDGNWLAELGPMF
YSVKIPQKSRVQARQEMKNHEKAMEEEMAAAEEKLKRMKKEKEEKEMLKPKTPIFKRPAT
PRKPSRLGL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcaccacagaccatcaagttcacattctcacaagtcatctgtcagcgatgag
tacctcgctcgtaaaagggagaaagaagaaagagaaagacgccgcaagttgaaaggaatg
tacctggaaaatcgtgaaaaaaaacttgaacccaagagaaggaaatgggaagatgattat
gaggttgatgaagagtatgccaagagttgggagacaagcccccggtcaacaagaagttca
acaccaagctctcgatctcatcgatcatatacaccaagacccggttctactccaagaccc
ggttccactccaagaccaggttcctcaagacatggatctgttgctggaacacctagagtt
ccttacagctactgggaaaatccctcaatgcgtagagaagaggttgatgaagatcctgaa
ttaatgaaagagttagatcgtcgttggtatgatgatttagctgatgtaaaaccttttgat
gacatgccagaggaatatgttataaagaaagaggaagctttgaaaaagagtagagttcag
aggatatcagctcaacgacggcaaattcaaaaggataatgaaaagtgggaaaataatcgt
ttacttttatctggagtcatgaaacaaacggacgaggagttagaagacacttccgaagaa
gaaagagttcacttaattgttcacaatattgtcccaccatttcttgatgggcgaattgta
tttaccaaacaattcgagccagttatccctgttaaagatggtacttcaaatatagcgatt
tgcgcaaaaaaagggtctgctttaacaagatatcaccgagagatgaaagagcgaaaaaaa
gcacagaagaaagaatgggagctcgcgggaactcgcattggtgatattatgggtatcaaa
aaagaaaaagaagatccaaaaaacaacagcgaaactgactatagaacagaacatcgtttt
ggggatcatctcgataacaaattaaccgacagagaaaaaatcagacgccaaagacaaatg
ttacctgtttttgcagtacgaagtgcattaatgaacgtcatccgtgaaaacaacatcatc
gttattgttggtgaaaccggttcaggtaaaacaacacaattaactcaatatctacatgag
gaagggtatacaagctatggaatgatcggatgtacgcaaccccgtcgtgttgcagcaatg
tcagttgccaaaagagtttcagatgaaatgggtgttaaattaggagaagaagtcggatat
tcaattcgatttgaagatagaacatcaaagaaaacgatcatcaagtacatgactgacggt
attcttcttcgagaatccttatctgatccagatctcgacaattattcagctatcatcatg
gacgaagctcacgaaagaagtttaaatactgatgttttgtttggaatcttacgagaagtt
gctgctaagcgaatcgacctgaaactgatcgtaacttcagcaactatggactcttccaaa
tttgcattgttttttggtaatgtgcctgtattcaccattcctggacgtacttttcccgtc
gacgttctacacagtaaaaacgttgttgaagattatgtagatcaagcaatcaagaaagca
atagagatccatttaagtatgcctcctggtgatatcttaatttttatgcctggtcaagaa
gatattgatgttacatgtgaagctatcactgaacgtttaaaagacttagaagatacatca
aaaccacctcctctctctattttacccatttactcacagcttccatctgatctgcaagcg
aaaatttttcaaaaatctgaagatgatgttaggaaatgcgtggtagctacaaatattgct
gaaacatctttaacaattgatggaataaaatacgtaattgactctggtttttgtaagctt
aaagtttataatccgaaaattggtatggatgctcttcaaatttatcctatttcccaagct
aatgctaatcagagatcaggtcgagccggtagaactggtcctggtcaatgtttccgttta
tataccgaagatcaataccgacatgaattacttacaacgtcagtgcctgagattcaacgt
acaaacttggctaatgttattctcctccttaaatcactcggagttcaggatttgttagaa
tttcattttatggatcctcctccacaagacaatatgctgaattcaatgtatcaattgtgg
attcttggtgctcttgataatgtaggaaacttaactccactcggtcgtaatatggtcgag
tttccattggatccagccatgtctaaaatgttgttgatttcaacagaaatgggttgctct
gaagagatgatgacgattgtgtctatgttatctgtccagtcaattatatatcgaccaaaa
ggacgtgaagaggaatctgatagtgttagagaaaaatttcacgtaccagaatcagatcat
ctaaccttgttgaatatttaccagttctgggaaagagaacaaaataaatcttcatggtgt
aaagaacattttattcacatgaaatcaatgaaaaaagtgagagaagtccgtcaacaattg
agagatattatgaaaagtttaaaactgccgatcatttcttctggtaatgaatgggattgt
atcagaaaatgtatcgcttcagcatatttccatcaagcagctagattgaaaggaatcggt
gaatatgtaaatatgaggaatggaataccatgtcatcttcaccccacttcttcactctat
ggaatgggttttacgccagattatgttgtttatcatgaacttttgatgacttccaaagag
tacatgcacacagttacggcagtggatggtaattggttagctgaacttgggcctatgttt
tattctgtaaaaatacctcaaaaatcacgggttcaagctagacaagaaatgaaaaatcac
gagaaagcaatggaggaggaaatggccgctgctgaagaaaagttgaagaggatgaaaaaa
gagaaagaagagaaagaaatgttgaaaccaaaaacgccgatattcaagcgtcctgcaact
ccaagaaaaccgtctagactcggattgtaa
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