Tetranychus urticae (two-spotted spider mite): 107367347
Help
Entry
107367347 CDS
T04901
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107367347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107367347
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107367347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
Ras
AAA_22
GTP_EFTU_D4
EPO_TPO
Motif
Other DBs
NCBI-GeneID:
107367347
NCBI-ProteinID:
XP_015790525
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MARHRNIRGLNYDEEYDDVYNSTYGTSVEDDYCISPGTEAQFTYNRGGSRDDSRLSGYLQ
NWNRSGDIQEETNDETDSPVELDRRPSDGSIDNTIKFLDQTEQVQLQSCVLELQNVVGET
VPESILKEKALKHRFDVEKALDEVLNPSKWKMQSNAQTKVKISEPKRPEIKKRQEELDTK
IDKLLESFLGKQLKMESSSSTSSFHNHSKVNSLSSSKQCKNSITTSPSTNPTSADSKTCI
APPLNFILDLDDGHISLTSKIDNVRLPNFVITLTARYKPDLSRIVNPRIGLKERLVEYHK
QQAFKSFDFLTPSPDDLRLNRRSGLTREPVEHVATDVPDEVAARLEKKAGKESPQVKAVD
RLRESLHVDKKERKKSPAAVDRSSPSGPQVIGAAKNQVKIISKESVIQEFTKERLGKKTL
INLVVVGHVDAGKSTLMGHLLYRLGQVSKKNMHRYETDSKKIGKASFLYAWVLDETDEER
NRGITMDIAQSSFETATKSVNLLDAPGHRDFIPNMITGAAQADAALLVIDATNGEFEAGF
EAGGQTREHTLLIRSLGVSQLAVVVNKLDNVNWSKQRFDEIVGKLTPFLKQAGYKDHDVT
FVPCSGLTGENLNERSKNPSLTAWYSGLSLVEVIDAFKAPERPVSKPFRLSIGDVFKGLT
SGVCISGRIESGAVQLGQKLIVMPSGEQAVVKAISVDDNPLTQAFAGDQIALTLTGCDVA
NIATGNILCDLTDPSPATTRFLAKIVVFNNVQVPLTKGVPVVLHCKNLQEQVTIRKLVSQ
VNKSTGQVMKAKPRCLPSNTSGIVEIESSRPISIELYQEYKDLGRIMLRSRGTTVAAGLV
VQIL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacatcgtaacatccgtggtctcaattacgatgaagaatatgacgacgtttac
aattccacttatggtacttcagtagaagatgattactgcatttcacctgggactgaagct
cagttcacctataaccgaggtggaagtcgtgatgactccagactgtccggttaccttcaa
aattggaatagaagtggagacattcaagaggaaaccaatgatgaaactgattccccagtt
gagctggatcgtagaccatctgatggtagtatcgacaatacaataaaatttttagaccaa
actgagcaagttcaattgcagtcatgtgttttagaacttcagaacgtggttggtgaaaca
gtacctgaatcaatcctcaaagaaaaagctctgaagcaccgattcgatgtagaaaaagct
cttgacgaagttctgaatccgtctaaatggaaaatgcaatcaaatgctcaaaccaaagtc
aaaatttctgaaccgaaaagacctgaaattaagaaaagacaagaagaattggatacaaag
atcgataaactccttgagtctttccttggcaaacaacttaaaatggaatcatcatcatcc
acatcatctttccataatcattcaaaagtcaattctctctcatcctcaaaacagtgtaaa
aactctattaccacttctccatcaactaaccctacctcagctgattctaaaacgtgtata
gctcctccacttaattttatattagaccttgatgatggtcatatcagccttactagtaaa
atcgataatgtaaggttgcccaattttgttattaccctcactgccagatataaaccggat
ctatcgagaattgttaatccaaggattggactcaaggagagattggttgagtatcacaaa
caacaagcctttaaaagctttgactttttaacaccatcaccagatgatctaagacttaat
cgaagatctggattaacaagagaacctgttgaacatgttgcaacggatgtgccagatgaa
gtggcagcaagactcgaaaagaaagctggtaaagaatcaccgcaggttaaagctgtcgat
agactaagagaaagtttgcatgtggacaaaaaagaaagaaagaaaagccctgctgcagta
gatagatcatctccatcaggaccacaagtcattggggcagccaaaaatcaagtcaagata
atctcaaaagaaagtgttatccaagagtttactaaagaaagattaggaaagaaaacttta
atcaacttggttgttgttggccatgttgatgctggtaaatcaactttaatgggccattta
ttgtatagattaggtcaagtatcgaagaaaaatatgcatcgatatgagacagattctaaa
aaaatcggaaaagcatcttttctttatgcatgggttcttgatgaaacggatgaggaacga
aaccgtggtatcaccatggatatagctcaatcttcttttgaaaccgcaacgaaatcagta
aatcttcttgatgctcctggtcatcgagatttcattcctaacatgattactggtgcagct
caagctgatgcagctttgttagtcatagatgccaccaacggtgaatttgaagctggtttt
gaagctggtggtcaaactcgagagcatactttactcattcgatcgttgggtgtttcacaa
ttagctgtggtagttaacaaacttgataatgttaattggagtaaacagagattcgatgaa
atcgtgggaaagttaactccattccttaagcaagctggttataaagatcatgatgtcact
tttgtgccttgtagtggcttaactggagaaaatctgaatgaacgctcaaaaaatccctca
ctcaccgcatggtattcaggtttatcactcgtcgaagtaatcgacgcttttaaagctcca
gaaaggcctgtttcaaaaccattccgtttaagtatcggggatgtttttaaagggctaact
tctggtgtgtgtatttctggtcgaattgaatcaggcgctgtacagttaggtcaaaagctc
atcgtaatgccttcaggtgaacaagcagtcgtcaaagccatttccgtggatgataatcct
ttaactcaagcatttgccggtgatcaaatcgccttaacattaactggttgtgatgttgct
aatattgctactggtaatatactttgtgatttaactgacccttcaccagctacaactcgt
ttcctggctaaaattgttgtattcaacaatgttcaagttccattaactaaaggagttcct
gttgtattgcattgcaaaaatttacaagagcaagtcaccatcagaaaacttgtttcacaa
gtgaataaaagtaccggacaagtgatgaaagcaaagcctcgatgtttaccttccaataca
agtggaatcgtagaaattgaatcatccagacccatatcaatcgaactataccaggaatac
aaagatctcggacgtattatgcttcggtctagagggactactgtggccgctggtttggtc
gtgcagattttatga
DBGET
integrated database retrieval system
