Tetranychus urticae (two-spotted spider mite): 107367600
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Entry
107367600 CDS
T04901
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03030
DNA replication
tut03410
Base excision repair
tut03420
Nucleotide excision repair
tut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107367600
03410 Base excision repair
107367600
03420 Nucleotide excision repair
107367600
03430 Mismatch repair
107367600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tut03032
]
107367600
03036 Chromosome and associated proteins [BR:
tut03036
]
107367600
03400 DNA repair and recombination proteins [BR:
tut03400
]
107367600
DNA replication proteins [BR:
tut03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107367600
DNA Replication Termination Factors
ELG1-RFC complex
107367600
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107367600
DNA repair and recombination proteins [BR:
tut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107367600
Check point factors
HRAD17(Rad24)-RFC complex
107367600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_11
Rad17
AAA_24
ResIII
AAA_22
AAA_30
AAA_16
AAA_2
AAA_14
Gp44_lid
DUF815
AAA_7
Mg_chelatase
AAA_5
SLFN-g3_helicase
AAA_assoc_2
DEAD
RuvB_N
AAA_19
AAA_28
nSTAND3
ATPase_2
bpMoxR
IstB_IS21
RNA_helicase
PhoH
Bac_DnaA
AAA_18
AAA_25
Kinesin
Microtub_bd
Viral_helicase1
DUF6921
ABC_tran
DUF4119
Motif
Other DBs
NCBI-GeneID:
107367600
NCBI-ProteinID:
XP_015790813
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MVPWVEKYRPKNIDEVVYQEEAVNVLKQCLKGDDFPNLLFYGPPGTGKTSTILALAREMF
QDQFSSRVLELNASDERGIAVIREKVKRFAQQTVSRSENGNKYPPFKIIVLDEADSMTQS
AQACLRRIMEKETKSTRFCIICNYISRIIDPIVSRCSKFRFKPLQQDLVMEKLATICNSE
NISLENDVVLTELIKVSGGDLRKAITFLQTAYRLKGDEILTINDVREVTGYIPENWIDMF
VEACQKQSYENVEDVLNSMVAEGFSGAQLLNQLHDWVLGENCLLTDEQISELIEALALAD
YRLLEGADEFLQTFNVASVFIQLLGKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggtaccttgggttgaaaaatatcgtccaaaaaatatcgatgaagttgtttatcaagaa
gaagctgttaatgtccttaaacaatgtttaaaaggagacgactttccaaatttattgttc
tatggcccaccaggtactggtaaaacatcaacaattttagcattagctcgagaaatgttt
caagatcagttttcatcgagagtattagaattgaacgcttccgacgaaagaggtattgct
gttattagagaaaaggttaaacgttttgctcaacaaactgtaagtcgaagtgaaaatgga
aataagtatccaccattcaagataatagtattggatgaagctgattctatgactcaatct
gctcaagcctgcttgagacgaataatggaaaaggaaacaaaatcaacgcgtttttgtatt
atatgtaattatatcagcagaattatcgatccaatagtttccagatgttctaagtttaga
tttaagccgttacaacaagatttagttatggaaaagttggcaacaatttgcaatagtgaa
aatatttcattggaaaatgatgttgttctaacagaattgataaaagtatctggtggagat
ttacgtaaagcgataacatttttacaaacagcatatcgtttaaaaggagatgaaatattg
acaataaatgatgtacgagaagtgacaggttatataccagagaattggatagatatgttt
gtcgaagcttgccaaaaacaatcttacgagaatgttgaagatgttcttaatagtatggtt
gctgaaggtttttcaggagctcaattacttaatcaacttcatgattgggttcttggtgag
aattgtttattaactgatgaacagattagtgaattaattgaagcattagctttagctgat
taccgacttcttgaaggagcagatgaatttttacaaactttcaatgtagcctcagttttc
atacaattacttggaaagaaataa
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