Tetranychus urticae (two-spotted spider mite): 107367925
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Entry
107367925 CDS
T04901
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107367925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107367925
03041 Spliceosome [BR:
tut03041
]
107367925
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107367925
Spliceosome [BR:
tut03041
]
Complex B
Other components
Prp19-related factors
107367925
Complex C
107367925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_12
TPR_8
TPR_2
TPR_15
Mad3_BUB1_I
TPR_16
TPR_19
ARM_TT21
RPN7
TPR_MalT
TPR_21
NRDE-2
MIT
DUF7041
Mad3_BUB1_I_2
ARM_TT21_C
SNAP
Motif
Other DBs
NCBI-GeneID:
107367925
NCBI-ProteinID:
XP_015791170
UniProt:
T1KW46
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MNFESSLLSKLDLNSETEIVRHPYSTKHWLRYINAKKDEKAPVEVVNLLYERALKEIPGS
YKLWYGYLLWRKRNLGGKIINGPEYKQLNNCFERSLVFMHKMPRIWILYIDSLMHQHLIT
QSRRTFDRALQALPITQHNRIWPLYLKFVKSHRIPETAIRLYKRYLKLAPEDGEEFIDYL
RGIGRLDDAALKLYDIVNDDNFISKEGKSKHQLWNDLCELISKNPDKVQSLNVENIIREG
IKQYRDEQGKLWNAYAQYFTRSGLFERARDIYEEAISSVMTIKDFSLVFDAYCQSEENLL
KAQMEAQDSTDDEEIVLELQLAKYEYLIERRPLLLNSVALKQNPHNVDEWHKRVKLLEEN
PLKVVRTYMNAVQTVDPKQAIGKVHSLWIEFAKFYEKNGQLEDAREVFEQAVKASYARVN
DLATVWCEYAEMELRSDNFEQALKLMQRATTASKKANFFDENEPVQNRVHRSLKLWLMYA
DLEESFGTFKTTKATYDAMIDLRIITPQIIMNYGVFLEENNYYEEAFKAYEKGIDLFKWP
IVYDLWNTYLTKFLHRYKGEKIERTRDLFEQCLRGCPPSLCKNFYLLFARFELDYGLAKN
SMTILERATQAVDADSRFDLYNIYIKKAAEMFDLTYTRQIYERAIENLRDNEAREMCLRF
ADLEQKLGEIDRARAIYAHCSQISDPRTQPEFWDIWKLFETKHGNEDTLREMLRIKRSFQ
ASANTSVNFVAAQMSNVPATISYPVIDNSQFQNSNFNKDEIDIETDITDVDMK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaagctcattactatcaaaattggacttgaattccgagacagaaattgtc
cgacatccttactcaaccaaacattggcttcgatatattaatgctaagaaagatgaaaag
gctcctgttgaagttgtcaacttattatacgagcgagctttgaaagaaatacctggaagt
tataagttatggtatggatacctgctttggaggaaaagaaatttgggtggcaaaataatc
aatggacctgaatacaaacaattaaacaattgttttgagagaagtttggttttcatgcat
aagatgcctcgtatctggattctatacatcgattctttgatgcaccaacatcttattacc
caatcaagacgtacatttgaccgtgctctacaagccttgcccattactcaacacaatcgg
atttggcctctttatttgaagtttgtgaaatcccatcggattcctgagacagcgattaga
ctttacaagagatatctaaaactggctccagaagatggtgaagagttcatcgattatttg
agaggaatcggaagactcgatgatgcagcccttaaattatatgatattgtcaatgatgac
aactttatttccaaggaaggaaaatcaaagcatcaactttggaacgacttatgtgaatta
atctccaaaaatcctgataaagttcaatcattgaatgtcgaaaacattataagagaagga
atcaaacaatatagagatgagcaaggtaaactttggaatgcatatgcccaatactttaca
cgaagcggattatttgaaagagctagagatatttacgaagaagcgatctcatctgtaatg
accatcaaagatttttcacttgtttttgatgcatattgtcaaagtgaggaaaatctcctt
aaagctcagatggaggctcaagattcaaccgacgatgaggagattgtattggagcttcaa
ctcgcaaaatacgagtatttgattgagaggaggccgttgttactgaacagtgttgcactt
aagcaaaatcctcataatgttgacgaatggcataaaagagtaaaactattggaagaaaat
cctttgaaagtcgttcgaacttacatgaatgctgttcaaaccgttgatcccaagcaagca
attggaaaagtacattctttatggatcgagtttgccaaattttatgaaaaaaatggacaa
ctagaagatgcacgagaagtattcgagcaagctgtcaaagcatcgtatgccagagtcaat
gatttagcaactgtttggtgtgaatatgccgaaatggaattaagaagtgataattttgag
caagcactgaagctcatgcaaagagccactacagcttccaaaaaggctaactttttcgat
gaaaatgaacctgttcaaaatcgtgttcaccgttctctcaaactttggttgatgtatgct
gatctagaggagagttttggaactttcaaaacaacgaaagctacgtatgatgcgatgata
gatttgagaattatcactccacaaattataatgaattatggagtgtttcttgaagaaaac
aattattatgaagaagctttcaaagcttatgaaaaaggaattgatttattcaaatggccg
atcgtttacgatctctggaacacatatttaaccaaatttttgcatcgttacaaaggcgaa
aagatagaaagaacacgtgatttgtttgagcagtgcttgcgaggatgtccaccaagccta
tgcaagaatttctacctcctttttgcccgatttgaattggattatggactggctaagaat
tcgatgacaattcttgaaagagctactcaagctgttgatgcagacagtcgttttgattta
tataatatttatataaagaaagcagctgaaatgttcgacctaacatatacaagacaaata
tatgagagagctatcgaaaatctcagggataacgaagcacgagagatgtgtcttagattc
gctgatctcgaacaaaaattaggagaaattgatcgagcacgagctatttacgctcactgt
agtcaaatatccgatcctagaacacaaccagaattttgggatatttggaagttattcgaa
actaaacatggtaacgaggatacattaagagaaatgttacgaatcaagagaagtttccaa
gcatctgcaaacacatcagtcaatttcgtggctgcacaaatgagtaatgtgcctgcgaca
atatcttaccctgtcatcgacaatagtcaatttcaaaattcaaatttcaacaaagatgaa
attgatatcgaaacagatataactgatgtagatatgaagtaa
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integrated database retrieval system
