Tetranychus urticae (two-spotted spider mite): 107368068
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Entry
107368068 CDS
T04901
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03013
Nucleocytoplasmic transport
tut03015
mRNA surveillance pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107368068
09122 Translation
03013 Nucleocytoplasmic transport
107368068
03015 mRNA surveillance pathway
107368068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107368068
03041 Spliceosome [BR:
tut03041
]
107368068
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107368068
TREX complex
107368068
Spliceosome [BR:
tut03041
]
Complex C
Other components
EJC/TREX
107368068
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107368068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107368068
NCBI-ProteinID:
XP_015791337
UniProt:
T1KX53
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MTDKIDMSLDAIIKMDGISGYKKGAGARRGGGNTGNAGSGSTARNNAASGNRNRGAMKNK
MNRNNRSTPYSRASRIPDKWQHDMFDGPSRTPGSNHLLVSNLDYGVSDKDIQDLFAEFGL
IKKAAVHYDRSGRSLGTADVIFEKRGDAAAAMKQYNGVLLDGRPMKITLVPSGDMSQRSK
PNVSSPGQGNFRSPKFGNASRGANSGARSRGRGGGAGGLSNKGPRRNNQNRKSLTAEELD
AELDAYVNK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaatcgacatgtctctggatgctatcattaagatggatggtatttctggt
tataaaaaaggagctggtgctcgaagaggtggtggtaatactggcaatgctggttcaggt
tcaactgctagaaacaatgctgcttctggaaatcgtaatcgtggagcaatgaaaaataag
atgaaccgaaataatagatctactccttattcacgggcatcaaggatacccgataagtgg
caacatgatatgtttgacggaccatctcgtacacctggttcaaaccatctattggtatct
aatttagattatggtgtttccgataaagacatccaagacttatttgctgaatttggactc
attaaaaaagctgctgttcactatgatagatctggtcgatctcttggtacggctgatgtt
atatttgaaaagcgaggtgatgctgctgccgctatgaaacaatacaatggagtgcttctt
gatggtcgaccaatgaagattactttggttccatctggagatatgtctcaaagaagtaaa
ccaaacgtctcatcaccaggccaaggaaacttcagatcaccaaaatttggtaatgcttcc
agaggagcgaattctggtgccagatctcgtggtcgtggtggtggagctggcgggttatct
aataaaggacccaggcgtaataatcaaaatcgtaaatctctgaccgctgaagagttagat
gcagaattagatgcatatgtcaacaaatag
DBGET
integrated database retrieval system
