Tetranychus urticae (two-spotted spider mite): 107368244
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Entry
107368244 CDS
T04901
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03013
Nucleocytoplasmic transport
tut03015
mRNA surveillance pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107368244
09122 Translation
03013 Nucleocytoplasmic transport
107368244
03015 mRNA surveillance pathway
107368244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107368244
03041 Spliceosome [BR:
tut03041
]
107368244
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107368244
Spliceosome [BR:
tut03041
]
Common components
Common spliceosomal components
Cap binding complex
107368244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
ALIX_LYPXL_bnd
Vfa1
DUF3560
TBCA
PCRF
Motif
Other DBs
NCBI-GeneID:
107368244
NCBI-ProteinID:
XP_015791520
UniProt:
T1KXW2
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSKRRNWDDDPERPRKRYRNERPTEEEDIEDNLEHLIVKLGDRSTSALEKNLEELVEILD
HDVSKSAKSNIIKIICDCVANLPEKTSIYATLVGLLNNKNYHVGGDIIEMLVKCFKDCTK
ACEWDKSLSYVRFFGDLVNCHVISHGSLMNLFETLVDVTMEDNIPQVRSDFFVYAVLSAL
PWVGYELCDKKEQDLEQLLNTIDNYMTKRSKVHHTALRVWYSDTPHPQEEYLDCLWSQIT
KLRSDKWEENHIYRPYINFSKALCEALQHNLPAITIPPHDASYTYPYPKVVFRLFDYTDC
PDGPILPGAHSIDRYLIEQNIRWILSTHHRDLKTCSFSLIGLQGGHKFPLEYVLVETILA
EIFALPTSKYLEIFYGSLLLKLCKMQPGSLPQVLAQAVEMIFDRLDTMNVACVDRFASWF
AYHLSNFQYAWNWDDWSACLTLDPLHPKPKFVRECLLRCMRLSYHQRIAEIVPDGFKILL
PDLPEPMNKYAVTDESIKIPGSGLSNQLNELIKNKTPIEEIMKTLDDLDNSTNAGDAEFT
PHSLKIDVFLTVLLNAASKSFSHLFSALLKYNQILLSLNNSEDAQRCILNAIYEVWRRHP
QLLVVLTDKLLKAGIVDFPAVANWIFSKELANDFTRSYIWEILHSTIRRHIKQVENLQKK
LQELKEAKEKSEKAQSTDKDEKDIKEEKEVEPSNEEAIESLEEKVETALSDQKNLFLIVF
QHFIMILSEHIQTCEAKGRSFKNHWFRWCIGRLQQVFEHHQHVFKYNSVLESLLFTNDID
AHILIIFRQFCSLQA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagaaggaattgggatgatgatccggagagacctaggaaaagatatagaaat
gaacgtcctactgaggaagaggacattgaagacaatttggaacacttaattgttaagctt
ggtgacaggagtacatcagctttggagaaaaatttagaggagttggtggaaattcttgac
catgatgtctccaagtcagctaagagcaatattatcaaaattatatgtgattgtgttgct
aatttaccggagaaaacatcaatctatgccactttggttggacttctgaataataaaaac
taccatgttggtggtgatatcatcgaaatgctagtgaaatgtttcaaggattgtacaaaa
gcatgtgaatgggataagagtttatcatatgtccgattttttggtgaccttgtcaactgc
catgtgatctctcatggatctttgatgaatctttttgaaactctggttgatgttactatg
gaggataatattcctcaggttcgctcagatttcttcgtttatgcagttttatcagcctta
ccctgggttggctatgaactttgtgataaaaaagaacaagatttagaacaattactaaac
actattgacaattatatgactaaaagatccaaggttcaccacacagccttgcgagtttgg
tactccgatacaccacatccacaagaagagtatcttgactgcctttggtctcaaataact
aagttgcgaagtgataaatgggaagaaaatcatatttatagaccgtatatcaattttagc
aaggctttgtgtgaagcactccaacataatctacctgcaatcacaataccacctcatgat
gcttcttatacctatccatatcccaaagttgtgttccgactctttgactatactgactgt
cctgatggtccaattctgcctggtgctcattcgattgatcgttatttgattgagcaaaat
atacgctggattttatctactcatcaccgagatcttaaaacttgctcattttccttgatt
ggattacaaggaggtcacaaatttccattggaatacgttcttgtagaaactattttagct
gaaattttcgcattgcctacttccaagtacttagaaatattctatggatcattgcttctt
aaactctgtaagatgcaacccggatctctacctcaagttcttgcccaagcagtagaaatg
atatttgatcgcttagacactatgaacgtagcctgtgtagatcggtttgcatcatggttt
gcttatcatctgagtaatttccaatatgcttggaattgggatgattggtcagcctgctta
acattagatcctcttcatcctaaaccaaagtttgtccgagagtgcttactgcgatgtatg
agactttcatatcaccaaagaatagccgaaatagttcctgatggattcaaaattctttta
cctgatctccctgaaccgatgaataaatatgctgttacagacgagtcaattaaaatacct
ggaagcggtttatcaaatcaacttaatgagctaataaagaacaaaactcctatagaagaa
ataatgaaaaccttggatgatttagacaatagtactaacgctggtgatgctgaattcact
ccacattccttaaaaattgatgttttcttaacggttttactgaatgcagcatctaaatca
ttctctcatctattctctgcgcttctcaagtataatcaaatactgctgtccttaaataat
tccgaggatgctcaacgatgtattcttaacgcgatttatgaggtttggagacgacatcca
caacttctcgtggtacttactgacaaattattaaaagctggtattgttgatttccctgct
gtagccaattggattttttcaaaagaattagccaatgatttcactaggtcttatatttgg
gagattttgcattccacgatccgtcgtcacatcaaacaagtggaaaacttgcaaaaaaaa
ttgcaggagttgaaagaagcaaaagaaaaatctgaaaaggctcagagtactgacaaggat
gaaaaagatatcaaagaggaaaaagaggtcgagccatctaatgaagaggctatagagagc
ttggaggaaaaagtcgaaactgctctttctgatcagaaaaatttattcttgatcgtattt
caacattttattatgattctgtccgagcatattcaaacatgtgaagcaaagggaagaagc
ttcaaaaatcattggttccgttggtgtattggacgacttcaacaagtatttgagcatcat
caacatgttttcaaatataattctgttcttgaatctctcctcttcacgaacgatatcgat
gcgcacatcctaataatattcagacaattttgctccttgcaagcttaa
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