| Entry |
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| Name |
(RefSeq) collagen alpha-1(I) chain
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| KO |
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| Organism |
tut Tetranychus urticae (two-spotted spider mite)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tut00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107368669
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:tut00536]
107368669
Glycosaminoglycan binding proteins [BR:tut00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
107368669
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1400 aa
MSTTDAPFKVTSPPTTPITTTTATTTTVKSTSTVTWESSSDQSEAIQTSRSANKQNVTSI
FPPISRDIRISTELRGDLESLSPVNQLNQAKILEPGIHISTPNSSQSESSPPGDLTAWFQ
SVAASQGTGNNEKGPSIEPFNYIQPQIGPTGPRGPAGPMGPPGPQGFPGPRGEPGEPGPP
GSPGIQGERGLPGANGRDGEIGLDGKPGNPGPPGAVGPRGTPGIPGIPGPKGHRGYPGVD
GVKGQPGIPGERGIPGKPGEPGPIGSVGPKGDRGRDGNSGLPGMRGIDGLPGPPGPVGPP
GRAGPPGFPGPPGIKGDSGQTGQKGDRGDFGPKGESGKPGEPGIPGAQGIRGVQGEKGTQ
GESGRNGQPGFPGARGPPGVEGPSGPIGPKGQAGSPGEPGLKGDVGRKGEPGTEGPRGPP
GPQGNHGRRGKPGLPGSPGLAGSQGERGLIGLTGPVGPEGPAGLKGDRGSPGPMGLTGLK
GSVGEPGSPGPQGPMGLRGPSGKPGPPGQDGIPGERGKPGDDGRPGEPGHPGQQGQPGLI
GMPGLKGDHGEPGKQGLVGQPGLKGDQGLPGPIGLTGQPGQTGPVGEKGASGPPGPPGFR
GPPGIQGLPGKDGEIGQPGIVGAPGERGARGDRGFPGERGPPGPIGLQGIKGDSGTPGSD
GSPGLPGPKGDRGHKGPPGIPGLPGSRGETGHPGSKGERGDIGLTGPEGSPGKTGEPGIP
GPMGPSGSTGETGQKGEPGQTGARGERGLPGEKGPMGPSGPPGFPGAPGQPGSQGIKGVS
GEKGDQGVGGPQGPPGPQGHQGAPGIMGIKGARGEEGKKGDAGFPGAPGRPGLRGLTGPQ
GPIGPIGLPGLKGSTGESGRAGPPGQSGLPGSPGLMGPKGDSGPEGASGPPGIPGQPGER
GERGYSGLPGAQGRPGSPGQPGPQGERGSDGKPGHEGPSGPPGPQGLPGPAGPCGEPGLK
GDSGKDGIPGRPGDKGPPGINGQPGPPGPPGIQGLIGPMGPVGQQGEKGSIGPQGNQGHQ
GPRGLQGLPGQPGMKGDRGEPGEKGIKGHRGFVGLPGSPGPKGESGEKGNSGITGVPGPI
GSPGPRGQPGRDGNPGSPGPVGPMGPRGSPGEPGRPGHPGQPGPPGTGCSSSCDSYAFDA
TTLAAILGQRQSKGPDPILGDEPSKLLSSSVPETEKKKMVNKYFTNLIDEYGKLRRPTGE
KEWPAKTCQDLVNDRPNLANGVYYIDPNEGDPSDAIQAYCNMETKETCIYPSPAIFERKH
RPSAKPGYSWLSEMSENINYKANSVQIKYLQMLTGQVHQNLTFHCYNAIGVYDANLKTYR
RSIKLLASNDVELSINGNSQFRYKILHDGCQDAEPNVWDKSIIEYKTTKTQRLPILDVAI
KDADSPNHQFGLELGPVCFN |
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| NT seq |
4203 nt +upstreamnt +downstreamnt
atgtccacaacagatgcaccatttaaagtcacttcaccaccaacaacacctattacaact
acaactgcaacaacgactaccgttaagtcaacatctactgttacatgggaaagttcatct
gatcaaagtgaagccattcagacatccagatccgccaataaacaaaatgttacctccatt
tttccaccaatctcaagagatataagaatttcaacggaacttagaggcgatcttgaaagt
ttatcaccagttaatcaattgaatcaagctaaaatattggaacccggaatccatatatca
acaccaaattccagtcaatctgaatcttcacctcctggtgatttaacagcttggttccaa
tcagttgctgcttcacaaggaaccggaaacaatgagaaaggaccttccattgaaccattt
aattatattcaacctcaaattggaccgactggtcctcgcggccctgcaggaccaatggga
ccaccgggtccacaaggatttcctggtcctagaggtgaacctggtgaacctggtccacca
ggatcgcctggtattcaaggcgaacgtggtctacccggtgctaatggacgtgatggggaa
attggtctcgatggtaagcctggaaatcctggaccaccaggagcagttgggccaagagga
acaccaggaataccaggaattcctggtccaaaaggacacagaggttatcctggggttgac
ggagtcaaaggtcaaccaggcattcctggagaaagaggcattccaggcaagcccggcgaa
cctggaccaattggcagtgttggcccaaaaggtgatcgaggacgtgatggtaactcaggt
cttccaggaatgagaggaatcgatggtttaccaggtccaccgggccctgttggtccacca
ggtagagctggaccaccaggatttccagggcctcctggtataaaaggtgatagcggtcaa
actggacagaaaggcgatagaggagatttcggtccaaaaggagaatctggcaaacctgga
gagccgggaattcctggagctcagggaattagaggagttcaaggtgaaaagggaactcaa
ggagaatctggtcgtaatggccagcctggctttcctggtgcacggggtccaccaggagtt
gaaggtccttcaggaccgattggaccaaaaggacaggcaggatcaccgggtgaacctgga
ctgaaaggtgatgtcggaagaaaaggcgaacctggtactgaaggaccacgaggacctcct
ggaccccaaggtaaccacggtcgaaggggtaaaccagggctgcctggatcaccaggttta
gcaggtagtcaaggagagcgtggccttatcggtcttacaggtcctgttggacccgaagga
ccggctggtctaaaaggagatcgaggttcgcctggaccaatgggccttacaggactaaaa
gggtcagttggtgagcctggaagtccgggaccacaaggaccaatgggacttcgaggtcct
agtggaaaacccggtcctcctggtcaagatggtattccaggcgaaagaggtaaaccagga
gatgatggtcgacctggggagccaggacatccaggtcaacagggtcaacctggattaatt
ggaatgcctggtttgaaaggagatcatggtgaacctgggaaacaaggattagttggtcaa
cctggacttaagggtgatcaaggattgcctggaccgattggattgactggtcaacctgga
caaactggacctgttggtgagaaaggggcttcaggacctcctggtccacctgggttcaga
gggccaccaggaattcaggggctgcctggaaaagatggtgaaataggccaacctggcata
gttggtgctcctggtgaacgtggagctcgaggtgatcgaggttttcccggtgaacgcggt
cctccaggaccgattggcttacaaggtatcaaaggggactcgggaactccagggtctgat
ggttcgccaggtttacctggacctaaaggggatcgaggtcataaaggacctcctggcatt
cctggtttaccaggatctcgaggcgaaactggacatcctggaagtaaaggtgaacgaggt
gatattggtctaacaggaccagaaggttctccgggtaaaactggtgagcctggaataccc
ggaccgatgggtccatctggaagtacaggtgaaactggtcagaaaggagaaccaggacaa
acaggagcacgaggtgaacgtgggttgcccggcgagaaaggtccgatgggtccttcagga
ccaccaggattccctggtgcaccaggtcagccaggatctcaaggaattaaaggagtttcg
ggcgaaaaaggtgaccaaggagttggcggacctcaaggacctcctggtccacaaggtcat
caaggtgcccccggaattatgggaattaaaggagccagaggagaggaaggaaagaaaggt
gatgctggattccctggtgctccaggcagaccagggttgagaggactaacaggtccacaa
gggccaatcggtccaattggacttccaggtcttaagggttccactggtgaatctggtaga
gctggtcctccgggtcaatcaggattacctggaagccctggtttaatgggtcctaaagga
gattcagggcctgaaggagcatcaggtccaccaggaattcctggccaacctggtgaacga
ggtgaaagaggttacagtggtttacctggagcacaaggcagaccaggatcaccaggtcaa
cctggtccacagggtgaacgtggttcagatggtaaaccaggccatgaaggaccatcagga
ccaccagggccacagggacttccaggaccagcaggtccatgtggagagcctggactcaaa
ggagattctggtaaagatggaatccctggtagacctggagacaagggacctcccggtatc
aatggacaaccaggacctcctggacctcctggaattcaaggtttaatcggaccaatgggt
ccagtcggtcaacagggtgaaaagggttccatcggtcctcaagggaaccaaggacaccaa
ggtccaagaggacttcaaggtttacctggacaaccaggaatgaaaggagatcggggcgaa
ccaggagagaaaggaataaaaggtcacagaggatttgttggtctaccaggatcaccagga
ccaaaaggagaatcaggagaaaagggaaattctggtattactggagtccctggtccgata
gggtcaccaggaccacgaggacaacctggtcgtgatggtaatccaggttctcctggtcca
gttggaccaatgggacctcgaggtagtcccggtgaacctggaagacctggacaccctgga
cagcctggtccaccaggaactggatgctcctcttcatgtgattcgtacgcatttgacgct
actacattagcagcaattttaggtcaacgacaaagcaaaggtccagatcccattcttggt
gatgaacccagtaaactactctcatcaagtgtacctgaaactgaaaagaaaaaaatggtc
aacaaatattttaccaatttaatcgatgaatacggtaaacttcgtagacctaccggtgaa
aaggaatggccggcaaaaacatgccaagatctcgttaatgaccgacccaatcttgcaaac
ggagtctattatattgatccaaatgagggtgatccaagtgatgcaattcaagcttattgt
aacatggaaactaaggaaacttgtatttatccctcgcctgcaatttttgaacgaaaacat
cgaccatccgctaaaccaggatattcatggcttagtgaaatgtctgaaaatattaactac
aaagccaattctgttcaaattaagtacttgcaaatgttaactggacaagttcatcaaaat
ttaactttccattgttataatgcgattggtgtttatgatgctaatctcaagacatatcga
aggtcaatcaaattacttgcttcaaacgatgtggagctatcgatcaatggtaactcacag
tttcgatataaaatattgcacgacggttgccaagatgctgagccaaatgtttgggataaa
agtattattgaatacaaaacgacaaagactcaacgactgccaattttagatgtagcaatt
aaggatgcagactcgcctaatcatcaattcggactcgaattgggtccagtttgtttcaat
tga |
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