Tetranychus urticae (two-spotted spider mite): 107368669
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Entry
107368669 CDS
T04901
Name
(RefSeq) collagen alpha-1(I) chain
KO
K19719
collagen type II alpha
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107368669
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tut00536
]
107368669
Glycosaminoglycan binding proteins [BR:
tut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107368669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
DUF2920
Motif
Other DBs
NCBI-GeneID:
107368669
NCBI-ProteinID:
XP_025017979
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MSTTDAPFKVTSPPTTPITTTTATTTTVKSTSTVTWESSSDQSEAIQTSRSANKQNVTSI
FPPISRDIRISTELRGDLESLSPVNQLNQAKILEPGIHISTPNSSQSESSPPGDLTAWFQ
SVAASQGTGNNEKGPSIEPFNYIQPQIGPTGPRGPAGPMGPPGPQGFPGPRGEPGEPGPP
GSPGIQGERGLPGANGRDGEIGLDGKPGNPGPPGAVGPRGTPGIPGIPGPKGHRGYPGVD
GVKGQPGIPGERGIPGKPGEPGPIGSVGPKGDRGRDGNSGLPGMRGIDGLPGPPGPVGPP
GRAGPPGFPGPPGIKGDSGQTGQKGDRGDFGPKGESGKPGEPGIPGAQGIRGVQGEKGTQ
GESGRNGQPGFPGARGPPGVEGPSGPIGPKGQAGSPGEPGLKGDVGRKGEPGTEGPRGPP
GPQGNHGRRGKPGLPGSPGLAGSQGERGLIGLTGPVGPEGPAGLKGDRGSPGPMGLTGLK
GSVGEPGSPGPQGPMGLRGPSGKPGPPGQDGIPGERGKPGDDGRPGEPGHPGQQGQPGLI
GMPGLKGDHGEPGKQGLVGQPGLKGDQGLPGPIGLTGQPGQTGPVGEKGASGPPGPPGFR
GPPGIQGLPGKDGEIGQPGIVGAPGERGARGDRGFPGERGPPGPIGLQGIKGDSGTPGSD
GSPGLPGPKGDRGHKGPPGIPGLPGSRGETGHPGSKGERGDIGLTGPEGSPGKTGEPGIP
GPMGPSGSTGETGQKGEPGQTGARGERGLPGEKGPMGPSGPPGFPGAPGQPGSQGIKGVS
GEKGDQGVGGPQGPPGPQGHQGAPGIMGIKGARGEEGKKGDAGFPGAPGRPGLRGLTGPQ
GPIGPIGLPGLKGSTGESGRAGPPGQSGLPGSPGLMGPKGDSGPEGASGPPGIPGQPGER
GERGYSGLPGAQGRPGSPGQPGPQGERGSDGKPGHEGPSGPPGPQGLPGPAGPCGEPGLK
GDSGKDGIPGRPGDKGPPGINGQPGPPGPPGIQGLIGPMGPVGQQGEKGSIGPQGNQGHQ
GPRGLQGLPGQPGMKGDRGEPGEKGIKGHRGFVGLPGSPGPKGESGEKGNSGITGVPGPI
GSPGPRGQPGRDGNPGSPGPVGPMGPRGSPGEPGRPGHPGQPGPPGTGCSSSCDSYAFDA
TTLAAILGQRQSKGPDPILGDEPSKLLSSSVPETEKKKMVNKYFTNLIDEYGKLRRPTGE
KEWPAKTCQDLVNDRPNLANGVYYIDPNEGDPSDAIQAYCNMETKETCIYPSPAIFERKH
RPSAKPGYSWLSEMSENINYKANSVQIKYLQMLTGQVHQNLTFHCYNAIGVYDANLKTYR
RSIKLLASNDVELSINGNSQFRYKILHDGCQDAEPNVWDKSIIEYKTTKTQRLPILDVAI
KDADSPNHQFGLELGPVCFN
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaacagatgcaccatttaaagtcacttcaccaccaacaacacctattacaact
acaactgcaacaacgactaccgttaagtcaacatctactgttacatgggaaagttcatct
gatcaaagtgaagccattcagacatccagatccgccaataaacaaaatgttacctccatt
tttccaccaatctcaagagatataagaatttcaacggaacttagaggcgatcttgaaagt
ttatcaccagttaatcaattgaatcaagctaaaatattggaacccggaatccatatatca
acaccaaattccagtcaatctgaatcttcacctcctggtgatttaacagcttggttccaa
tcagttgctgcttcacaaggaaccggaaacaatgagaaaggaccttccattgaaccattt
aattatattcaacctcaaattggaccgactggtcctcgcggccctgcaggaccaatggga
ccaccgggtccacaaggatttcctggtcctagaggtgaacctggtgaacctggtccacca
ggatcgcctggtattcaaggcgaacgtggtctacccggtgctaatggacgtgatggggaa
attggtctcgatggtaagcctggaaatcctggaccaccaggagcagttgggccaagagga
acaccaggaataccaggaattcctggtccaaaaggacacagaggttatcctggggttgac
ggagtcaaaggtcaaccaggcattcctggagaaagaggcattccaggcaagcccggcgaa
cctggaccaattggcagtgttggcccaaaaggtgatcgaggacgtgatggtaactcaggt
cttccaggaatgagaggaatcgatggtttaccaggtccaccgggccctgttggtccacca
ggtagagctggaccaccaggatttccagggcctcctggtataaaaggtgatagcggtcaa
actggacagaaaggcgatagaggagatttcggtccaaaaggagaatctggcaaacctgga
gagccgggaattcctggagctcagggaattagaggagttcaaggtgaaaagggaactcaa
ggagaatctggtcgtaatggccagcctggctttcctggtgcacggggtccaccaggagtt
gaaggtccttcaggaccgattggaccaaaaggacaggcaggatcaccgggtgaacctgga
ctgaaaggtgatgtcggaagaaaaggcgaacctggtactgaaggaccacgaggacctcct
ggaccccaaggtaaccacggtcgaaggggtaaaccagggctgcctggatcaccaggttta
gcaggtagtcaaggagagcgtggccttatcggtcttacaggtcctgttggacccgaagga
ccggctggtctaaaaggagatcgaggttcgcctggaccaatgggccttacaggactaaaa
gggtcagttggtgagcctggaagtccgggaccacaaggaccaatgggacttcgaggtcct
agtggaaaacccggtcctcctggtcaagatggtattccaggcgaaagaggtaaaccagga
gatgatggtcgacctggggagccaggacatccaggtcaacagggtcaacctggattaatt
ggaatgcctggtttgaaaggagatcatggtgaacctgggaaacaaggattagttggtcaa
cctggacttaagggtgatcaaggattgcctggaccgattggattgactggtcaacctgga
caaactggacctgttggtgagaaaggggcttcaggacctcctggtccacctgggttcaga
gggccaccaggaattcaggggctgcctggaaaagatggtgaaataggccaacctggcata
gttggtgctcctggtgaacgtggagctcgaggtgatcgaggttttcccggtgaacgcggt
cctccaggaccgattggcttacaaggtatcaaaggggactcgggaactccagggtctgat
ggttcgccaggtttacctggacctaaaggggatcgaggtcataaaggacctcctggcatt
cctggtttaccaggatctcgaggcgaaactggacatcctggaagtaaaggtgaacgaggt
gatattggtctaacaggaccagaaggttctccgggtaaaactggtgagcctggaataccc
ggaccgatgggtccatctggaagtacaggtgaaactggtcagaaaggagaaccaggacaa
acaggagcacgaggtgaacgtgggttgcccggcgagaaaggtccgatgggtccttcagga
ccaccaggattccctggtgcaccaggtcagccaggatctcaaggaattaaaggagtttcg
ggcgaaaaaggtgaccaaggagttggcggacctcaaggacctcctggtccacaaggtcat
caaggtgcccccggaattatgggaattaaaggagccagaggagaggaaggaaagaaaggt
gatgctggattccctggtgctccaggcagaccagggttgagaggactaacaggtccacaa
gggccaatcggtccaattggacttccaggtcttaagggttccactggtgaatctggtaga
gctggtcctccgggtcaatcaggattacctggaagccctggtttaatgggtcctaaagga
gattcagggcctgaaggagcatcaggtccaccaggaattcctggccaacctggtgaacga
ggtgaaagaggttacagtggtttacctggagcacaaggcagaccaggatcaccaggtcaa
cctggtccacagggtgaacgtggttcagatggtaaaccaggccatgaaggaccatcagga
ccaccagggccacagggacttccaggaccagcaggtccatgtggagagcctggactcaaa
ggagattctggtaaagatggaatccctggtagacctggagacaagggacctcccggtatc
aatggacaaccaggacctcctggacctcctggaattcaaggtttaatcggaccaatgggt
ccagtcggtcaacagggtgaaaagggttccatcggtcctcaagggaaccaaggacaccaa
ggtccaagaggacttcaaggtttacctggacaaccaggaatgaaaggagatcggggcgaa
ccaggagagaaaggaataaaaggtcacagaggatttgttggtctaccaggatcaccagga
ccaaaaggagaatcaggagaaaagggaaattctggtattactggagtccctggtccgata
gggtcaccaggaccacgaggacaacctggtcgtgatggtaatccaggttctcctggtcca
gttggaccaatgggacctcgaggtagtcccggtgaacctggaagacctggacaccctgga
cagcctggtccaccaggaactggatgctcctcttcatgtgattcgtacgcatttgacgct
actacattagcagcaattttaggtcaacgacaaagcaaaggtccagatcccattcttggt
gatgaacccagtaaactactctcatcaagtgtacctgaaactgaaaagaaaaaaatggtc
aacaaatattttaccaatttaatcgatgaatacggtaaacttcgtagacctaccggtgaa
aaggaatggccggcaaaaacatgccaagatctcgttaatgaccgacccaatcttgcaaac
ggagtctattatattgatccaaatgagggtgatccaagtgatgcaattcaagcttattgt
aacatggaaactaaggaaacttgtatttatccctcgcctgcaatttttgaacgaaaacat
cgaccatccgctaaaccaggatattcatggcttagtgaaatgtctgaaaatattaactac
aaagccaattctgttcaaattaagtacttgcaaatgttaactggacaagttcatcaaaat
ttaactttccattgttataatgcgattggtgtttatgatgctaatctcaagacatatcga
aggtcaatcaaattacttgcttcaaacgatgtggagctatcgatcaatggtaactcacag
tttcgatataaaatattgcacgacggttgccaagatgctgagccaaatgtttgggataaa
agtattattgaatacaaaacgacaaagactcaacgactgccaattttagatgtagcaatt
aaggatgcagactcgcctaatcatcaattcggactcgaattgggtccagtttgtttcaat
tga
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