Tetranychus urticae (two-spotted spider mite): 107368954
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Entry
107368954 CDS
T04901
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03013
Nucleocytoplasmic transport
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107368954
09122 Translation
03013 Nucleocytoplasmic transport
107368954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107368954
03041 Spliceosome [BR:
tut03041
]
107368954
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107368954
Spliceosome [BR:
tut03041
]
Complex C
Other components
EJC/TREX
107368954
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107368954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
107368954
NCBI-ProteinID:
XP_015792338
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MFTDKNWETSGKNDFIKAVRSHTDNPNELKKLLYICCNQAISGQLRHDWLISSLSNIVET
NPSIPILLTDVLLVCDIETLAADNKDQRENYLALLAGCSNKLIADVLLKERLDYDTIGEA
KIIANKKATSTKFIKLKTRLFYKQQKFNLFREESEGYAKLITELSQPGGFDCNHMLQVLR
SLIGCFNLDPNRVLDVVLECFECRPYLADSYISLLCNFLNNSSTLAQILAFKFSFYLNDN
SMVTPDSLYEVTALLLQQKLLSLHQIYPFLSPSDKTIFEYNQNEIKDARAYARKTFVSTE
EKPMEEDRLSDMEKFSLLINNQKLGLCLALLKVGDWKTAHELIERLPSFYAVTNPIIAKQ
LCSLIHYAMDIIYHSHSGLPSNIINKVKMYKCDGKPSIKQAETVEELKENVFPMISTLGP
FLHSDTLLISKIIRIGKSIMSTTPVGDVKYELLSILDEAILPSLSLIEGNCGLADELWQF
LCLFPYTARYRLYFNWKAEPSIPIMIRTRSVNMRRIKYIMKRLSKENVKYSGRQIGKLSH
SNPSFLFEYMSIQIQSYDNLIGPVVDSLKYLTSLSYDVLIYCIIEALSNSNKDRTLHDGA
TISPWLLSLANFCGSVVKKYPVELPGLLQFIANQLKAEKSLDLLILKEIIQKMAGIEASE
EMTNEQLAAMSGGELLRAEGGYFNQVRNTRKSSVRLKDTLLESNLAMPLCILMAQQRNCI
LYSKQEHSHIKLVGKLYDQCQETLVQYGSFLSCNLSIDDYIGRLPSLGALITNFNLSADV
AFFLVRPMIAHNVRQKFEELRKNERSSKGIHLYIEAWETVTKPFVDIIIPAFPTKFWEDL
SPRFFVTFWTLSIYDLEVPKSSYDHEVEKLKKQIQSTEDNKDMNPGKKKKEIERCRLLQE
KLLEEQLRQDEHVRRVRQRLEKERDQWFQSKLAKMEMTTQFLQHCLFPRSIFTATDALYC
AKFVHLLHTIKTPNFSTLICYDRIFGDISYTMSSCTENEANHYGRFLCALQETVMRWHKD
KLVFEKECAKYPGFVTKFFEKEPAHVDYESYRHVCHKWHYRLTKSFIVCLDSGDYVQIRN
ALIVLTKLITHFPAINSFAQAIERRIDNIRNTEQTKRPDLYALATGYSGQLKTKRATCVP
EHEFHLKPQQPVNSAKTPNNVKKESKQESNNTSAPVTKSPPPKEKKDNILKPRPPAEANE
NSSEKKKESKNETVRSAEKKEKAVKADRNHISSEKSVKSDSKSSVPSSPRKGDHRGRSVE
PPIEGQEREHKRRKIEAKTHEDGNVTSGGGAGPGTGVSTGGGSGTNSERRSEKEKERNEN
YERRRGGEDSTSSSPSTNNRNHEKKTANSSSRKRDLGDETPIDTNLKKKKDEESSKSKKT
SNSDERDSSRKSSETKRSSSSRKNKSEDK
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgataaaaattgggaaacttcgggtaaaaatgattttatcaaggcggttaga
tcacatactgataatccaaatgagttgaagaaactgctttatatatgctgtaaccaggcg
atcagtggacagttgaggcatgattggttgatctccagtctgtccaatattgtggagacc
aatccatccattcccattttgttaaccgatgtgctgttagtgtgtgatattgaaaccctt
gctgcggacaacaaggatcaaagggaaaattatcttgcacttttagcaggctgttcgaat
aaattgatagccgatgtcttacttaaggaaagattggattatgacaccattggcgaagcg
aagattattgccaataaaaaggccacctctactaagtttattaagctgaaaacgcggctc
ttctataagcagcaaaagttcaacttattcagagaagaaagtgaagggtacgctaaacta
ataactgaattaagtcaacctggaggctttgactgtaatcatatgcttcaagttttacga
tccttgattggttgttttaatctagatccaaatcgcgttttagatgttgtactggagtgc
ttcgaatgtagaccttatcttgctgattcatatatctctttattatgtaattttctaaat
aattcaagcacactggcccagatattagcgtttaaatttagtttttaccttaatgataac
tctatggtcacacctgactccttatatgaggtcacagctttacttctacagcagaaactc
ctgtcattacaccaaatctatccttttctaagtcctagtgataaaaccattttcgagtat
aatcaaaatgagatcaaagatgcacgagcttatgctcgaaaaacgtttgtttctaccgaa
gaaaaacctatggaggaagatcgtttatctgacatggaaaaattctctttacttattaac
aaccaaaagctcgggctttgtctagcattattgaaagttggagattggaaaactgctcat
gagctaatcgaacgtttaccaagtttttacgctgttaccaatccaattatagctaaacaa
ctatgttcattaattcattacgctatggatatcatctatcactcacattctggactacct
tctaacattatcaacaaagtaaaaatgtacaaatgtgatggaaaaccatcgattaaacaa
gccgaaactgtagaagaattgaaggaaaatgtctttcctatgatatcaaccctgggacct
tttcttcatagtgacactttgttgatctccaaaattataagaattggtaaatctattatg
agtactactcctgttggtgatgtcaagtatgagcttctaagcatactagacgaagcgatt
ctaccctcactttccctaatcgaaggtaactgtggtcttgctgatgagctttggcagttt
ctttgtcttttcccttacactgcacggtatcgactatattttaattggaaagctgagccc
tcaatccctatcatgattcgaacacgttcagttaatatgagaaggatcaagtacataatg
aaacgattaagcaaagaaaatgtgaaatattctggtcgccaaatcggaaaactaagtcac
tcaaatccatcttttctttttgaatatatgtccatccagattcaatcttacgataatcta
attggtcccgttgtcgactctttaaaatatttgacttctctttcgtatgatgttctcatt
tactgtatcattgaagccctctcaaattcaaacaaggacagaactcttcacgatggagct
acgatatcaccttggctactaagcttagctaatttctgtggatcagttgttaagaaatat
ccagtagaacttcctggtctacttcaatttatcgctaatcaattaaaagcggaaaaaagt
ctcgatctgttaatattgaaggaaattattcagaaaatggctggtatcgaagcatcagaa
gaaatgaccaatgaacagttagctgctatgtccggaggtgagctcttgagagctgaaggg
ggctactttaatcaagttcgtaatacaaggaaatcatctgttcgcttgaaagatactctt
ttagagtcaaaccttgccatgcctttatgtattctgatggcgcagcagcgtaactgtata
ttatacagcaagcaagagcattcacacattaaattggttgggaaactatatgatcagtgt
caagagactttggtccagtacggctcttttctttcatgcaatttaagtattgatgattac
attggaagattaccttctttgggagctttaataaccaattttaatttaagtgctgatgtc
gcgtttttcttggttcgccctatgatcgcgcataatgtcaggcaaaagtttgaggaactc
aggaaaaatgaaaggtcatcaaaaggaattcatttgtatatcgaggcatgggagaccgtt
acgaaaccatttgtagatatcattataccagcttttccaacaaagttctgggaagatttg
agtcctcgattttttgtaactttctggactttgtctatctatgatcttgaagtacctaaa
agtagttatgatcacgaagttgaaaaattgaaaaaacaaatacaatcgacagaagacaat
aaggatatgaatccaggaaaaaagaagaaagagattgaaagatgtagacttttacaagaa
aagcttttagaagaacaattgaggcaagatgagcatgtccgtcgtgttcgtcagaggcta
gaaaaagaacgagatcagtggtttcaatcaaaactagctaaaatggagatgacaactcag
ttccttcaacattgccttttccctaggtcaatatttactgctacggatgctctttattgc
gcaaaatttgtgcatcttctccacactattaaaacccccaatttttcaactttaatttgt
tatgatagaatatttggtgacatttcttacaccatgtcttcgtgtactgaaaacgaagca
aatcattatggaagattcctttgtgctctccaggagacagttatgagatggcataaggat
aagctagtttttgaaaaggaatgcgccaaatatccaggatttgtgactaaatttttcgag
aaagaaccagcacatgttgactatgaaagctaccgtcacgtttgccataaatggcattat
agattgacaaaatctttcattgtttgtcttgattcaggcgattatgttcaaatcaggaat
gctttaattgttttgactaaattaataactcattttccagccataaatagtttcgctcaa
gccattgagcgtaggattgataatattagaaacaccgaacaaactaaaagacctgatctt
tatgccttggccacaggttattctgggcaacttaaaactaaacgagcaacttgtgtaccg
gagcatgaattccacttgaaacctcaacaacctgttaatagtgcaaaaacaccaaacaat
gttaaaaaggagtctaaacaagaatctaataacacgtctgctcctgtgacaaaatcgcct
ccacccaaggagaaaaaagataatattcttaaaccacgtccaccggcggaagcaaatgaa
aattctagtgagaagaaaaaagaatctaagaacgaaactgtcagaagtgctgaaaagaag
gaaaaggcagtgaaagctgatcggaatcacatatcgtctgaaaaatctgtaaaatcggat
tcaaaatctagtgttccttcgtctccaaggaaaggagatcacagaggtcgaagcgttgag
ccaccgatcgaggggcaagagagggaacataaacgtcgtaaaatagaagcgaagactcat
gaagatggcaatgtgaccagtggcggaggagctggaccagggacgggagttagcacagga
ggaggaagtgggaccaatagtgaaagacgtagtgaaaaagaaaaggaaagaaatgaaaac
tatgaaagaagacgaggaggggaagattcaacatcctcatcaccttcaacaaacaatcgt
aatcacgagaagaagacagcaaattcatcatctaggaaaagggatctaggcgatgaaact
ccaatcgacactaatttaaagaaaaagaaagacgaagaatcgagtaaatcgaaaaaaacc
tctaatagcgatgaacgagattcaagtagaaagtcatccgaaacaaaaagaagctcatct
tcccgtaaaaacaaatcagaagataaataa
DBGET
integrated database retrieval system
