Tetranychus urticae (two-spotted spider mite): 107369469
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Entry
107369469 CDS
T04901
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107369469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107369469
03036 Chromosome and associated proteins [BR:
tut03036
]
107369469
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107369469
Coactivators
SAGA/TFTC/STAGA complex
107369469
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107369469
STAGA complex
107369469
TFTC complex
107369469
SAGA complex
107369469
SLIK complex
107369469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_NWD2_C
Nucleoporin_N
WD_LRWD1
Beta-prop_WDR75_2nd
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
107369469
NCBI-ProteinID:
XP_015792913
UniProt:
T1L1N7
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MADYEKSDNKFISFSSNNLTSYKSEHEPRVYEEGYMNLYKFIDSSLDAYKYELYTLNYPV
FVHMYLELVYNNHEDAAKKFMEKFGPHQEDFYQEDIKKLAIITKPSQMKESEIIDNFNNG
QSRFTIRLSKDTFYYLKRYLQDSSKSTSIIQNVIQEHLSLDFYEGLTRNKQQVEASLGGM
MGEAPRDANKVKVYVGLLKEPDINLSILDDDGDDAAVDPSGEGGEKPKKKKSKRDTLLSK
RARNDPNAPPITRIPLPELRDAEKMDKIHRMREASKRLKLSSETLPSICFYTLLNANVNN
NIAVLCIEISEDSALLSAGLSDSTIKVWSLTPNKLKTMKSAQELELIDREADDVLVRMMN
EKSATDLKVLHGHSGPVYSLSFSPDRNLLLSCSEDSTIRLWSLQTWTNICCYKGHCFPVW
DVVFSPHGYYFATCGHDRTARLWATDSHQPLRFFVGHFSDVDCIQFHPNSNYVASGSTDR
TIRVWDVLTGQCVRYFTGHKAKIYTLLFTTCGRYLISAGEDKKILVWDLSHGYLIACLSG
HTETIYTLAISRDGVMLASGGADDCIMLWDLAKLLDEADSEDMNMSQTPTVRTNTDKILL
KTFKTKATNVISIHFTRRNLALAAGVLH
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgattatgaaaaatcggacaacaaatttatctccttctcatccaacaatttgaca
tcctacaaaagtgaacatgagcctagagtatatgaagagggctatatgaatctttataaa
ttcatcgattcttcattggatgcttataaatatgaactgtatacattaaattatcctgtt
tttgttcatatgtacttagaacttgtttataacaatcatgaagatgctgccaagaaattt
atggaaaagtttggtcctcatcaagaagatttctaccaagaggatataaaaaagcttgcc
atcattacaaaaccaagtcaaatgaaagaaagtgaaattattgataatttcaataatgga
cagtcaagatttaccataagattgtcaaaagatactttctattacctcaaacgttacctt
caagattctagcaaatctacgtcaattatccagaatgtaatccaggaacatttatctctc
gatttctacgaaggtttaactcgaaataagcaacaagtcgaagcatcgcttggtggaatg
atgggtgaagctccgagagatgctaacaaagtgaaggtatatgtaggtttattaaaagaa
cctgatataaatttatcgatattggatgatgatggtgatgatgctgctgttgatccttct
ggagaaggaggagaaaagcccaagaaaaaaaaatcaaagagagatacattactttctaaa
agagcaaggaatgatccaaatgctccaccaatcacaagaattcctctacctgaactacga
gatgctgaaaaaatggataaaattcatagaatgagagaagcttcaaagagattgaaattg
agcagtgaaacccttccatctatttgtttttacactttactcaatgcaaatgtaaataat
aacattgctgtgctatgcattgagatctcagaagactctgctcttcttagcgcgggtctt
tcggattcaacaattaaagtatggtcattaactcctaataagctgaaaactatgaaatca
gctcaagagctcgaacttatcgatagggaagctgatgatgttttagttcgcatgatgaac
gaaaaatctgcaactgatctcaaagttctacatggtcatagtggtcctgtatactcttta
tcttttagtccagatagaaatcttttattatcttgttcagaagattcaacaatcagacta
tggagccttcaaacctggaccaatatatgttgttataaaggacattgctttccagtctgg
gatgttgttttcagtcctcatgggtactatttcgctacttgtggccacgatcgcacagct
cgtctttgggctacagactctcatcagccactaaggttttttgttggtcatttttccgat
gttgattgcattcaattccaccccaattcgaattacgttgcctcaggatcaacagatagg
actatcagagtatgggatgttttgactggtcaatgtgttcgctattttactggccataaa
gctaaaatctatacattgttatttacaacctgtggtcggtatttaatttcagccggtgaa
gataaaaagattcttgtgtgggatctgtctcatggctatctgattgcctgtctgagtggg
cataccgagacgatttacacacttgcaatcagtcgtgatggtgttatgctagcttcgggt
ggagccgatgattgcatcatgctttgggatttagctaagctccttgatgaagctgattca
gaagatatgaatatgtctcaaactccaactgtcagaaccaacacggacaaaattctgttg
aaaacattcaagaccaaagccactaatgtcatcagcattcattttaccagaaggaatttg
gcactagctgctggagttttacattag
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integrated database retrieval system
