Tetranychus urticae (two-spotted spider mite): 107369488
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Entry
107369488 CDS
T04901
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107369488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107369488
Enzymes [BR:
tut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
107369488
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107369488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107369488
NCBI-ProteinID:
XP_015792937
UniProt:
T1L247
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MEAKGDTVTTNEPSDPNVTQYKLEKETELRFEIDGKEKVQIELISGLAEIFGTELIKGKK
YEFFKGTKAAVFTWHGCVVDVTGNCSRIYIDQDTPMKFYANVHGGLEVLRNECKENGKRG
PFTLIVGPSDTGKATLARILCNFAIRRDKCPILIDLNVASNRIGIPGTIGVNAMERLADL
EDKTSPTAPLIFHFGSLSPEQNVNFYNSLVTRVAEVVEKKVELNKHVRYSGAFINTCNWL
AGENGYKSLLHIAAAFEVDVILVLDMKSLCYDLTQELPRSVKIIDTPKSSGVVRRNAAYR
DEMREERIRRYFYGSYKSCGPPKFSPYAFNIPFSQLKIYKVSSISTPASCLPIGMSPRDD
QTKLVNITPDPSLNRHILSVSFASDSSEGVKSNLMGFVCVTHVDTKRNFVRVLCPQPGPI
PSGSILLYSDIQFQDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaaaggtgataccgtgacaaccaacgaaccctcagatccaaatgtgacacaa
tacaaacttgaaaaggaaacagagttaagatttgagattgatggtaaagaaaaggttcaa
attgaattgatttctggtttagcagagatatttggaactgaactgataaagggcaaaaag
tatgaatttttcaaagggaccaaagcagcagttttcacttggcatggttgtgtagttgat
gtaaccggtaattgcagtcgcatctatattgatcaagatactccaatgaaattttatgca
aatgttcatggtggattggaggttttgaggaatgagtgtaaagaaaatggaaagagaggc
ccattcactttaatagttggtccatctgacacaggaaaggctacactcgctcgtatttta
tgtaattttgcgatcagaagagataagtgtccaatcctgattgatctcaacgtggcctct
aacagaattggaatacctggaaccataggagttaatgccatggagcggttagcagactta
gaggataaaacttctccaactgctcctctaatttttcatttcggttctctatcacctgaa
caaaacgttaacttttataactctctggttaccagagtagctgaagttgttgagaaaaaa
gtggaattgaacaaacacgtacgatattcaggagctttcataaatacttgcaattggctt
gcaggagagaatggatacaaatccttgctacacattgctgcagcattcgaggtggacgtt
attctggtcttggacatgaaaagcttatgctatgatttaactcaagagctacctagatct
gttaaaataattgacactcctaaaagtagtggggttgtccgtcgtaacgctgcctatcga
gatgaaatgagggaagaacggataagaagatatttctatggatcttataagtcttgtggt
cctcctaaattttcaccttatgcatttaacattcccttttctcaattaaaaatctacaaa
gttagttcaatatccacaccagcttcttgtttaccgattggaatgtctccaagagatgat
caaactaaacttgtcaatattactcctgatccatctttgaatcgtcatattttgtcggtc
agttttgctagcgattcatctgaaggtgttaaatctaatttaatgggttttgtttgtgtt
actcatgttgacacaaagagaaactttgttcgagttctttgtcctcaacctggaccaatt
ccttctgggtctatacttttatactctgacattcaattccaagattcagattga
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