KEGG   Tetranychus urticae (two-spotted spider mite): 107369675
Entry
107369675         CDS       T04901                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03020  RNA polymerase
tut03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107369675
  09124 Replication and repair
   03420 Nucleotide excision repair
    107369675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tut03021]
    107369675
   03400 DNA repair and recombination proteins [BR:tut03400]
    107369675
Transcription machinery [BR:tut03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107369675
DNA repair and recombination proteins [BR:tut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107369675
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 DZR Zn_ribbon_recom DUF4892 SR1P
Other DBs
NCBI-GeneID: 107369675
NCBI-ProteinID: XP_015793138
LinkDB
Position
Unknown
AA seq 128 aa
MPREGVSGDSGPTFVGIRFCQECNNMLYPKEDRENKVLLYACRNCDYKQIAENNCVYVNK
ITHDIDELSRIVPEVVHDPTLPRTKDHPCPKCHHKEAVFFQGQSRRAEDDMKLYYVCTDS
KCAHKWTE
NT seq 387 nt   +upstreamnt  +downstreamnt
atgccacgtgagggagtttctggtgattcaggaccaacttttgttggtataagattttgt
caagaatgtaacaacatgttgtacccaaaagaggaccgtgaaaacaaagtgcttctgtat
gcttgtagaaattgtgattacaaacagattgccgagaacaattgtgtttatgtgaacaaa
attactcatgacattgatgaactatctcgtattgtacccgaagtcgtacatgaccccact
ttaccccgtaccaaagatcacccatgccctaaatgccaccacaaggaagctgtctttttc
cagggtcaatccagaagagctgaagacgacatgaaactctattatgtttgcacggattcc
aaatgtgctcacaagtggactgagtga

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