Tetranychus urticae (two-spotted spider mite): 107370053
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Entry
107370053 CDS
T04901
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107370053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107370053
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107370053
mRNA degradation factors
5'-3' decay
Lsm complex
107370053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107370053
NCBI-ProteinID:
XP_015793512
LinkDB
All DBs
Position
Unknown
AA seq
131 aa
AA seq
DB search
MEPYLPGTASLIEVLDKKLMVLLRDGRTLIGYLRSIDQFANLVLHRTIERIHVDKKFGDI
DIGVIIIRGENVVLCGEIDAEREANSKLERVSVDEIFELQRNELVNKMEKEKLKMKEGFS
LGNCLDFLDDY
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatatttacctggcactgcaagtttaattgaagttcttgataagaaattgatg
gttttacttcgtgatggtcgcacgcttattggttatcttagaagcatcgatcaatttgcc
aatttagtcttacatcgaacaatcgaacgaattcatgtggataagaaatttggtgacatt
gatattggagtcatcatcataagaggtgaaaatgttgtcttgtgtggagaaattgatgct
gaaagggaagcaaacagtaagcttgaaagagtatcggttgatgaaatttttgaacttcaa
cgaaacgagctcgttaataagatggagaaagaaaaattgaaaatgaaagagggattctcg
ttaggaaattgcttggacttcctcgatgattactaa
DBGET
integrated database retrieval system
