Tetranychus urticae (two-spotted spider mite): 107370163
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Entry
107370163 CDS
T04901
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut04382
Cornified envelope formation
tut04512
ECM-receptor interaction
tut04518
Integrin signaling
tut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107370163
04518 Integrin signaling
107370163
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107370163
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107370163
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tut04147
]
107370163
00536 Glycosaminoglycan binding proteins [BR:
tut00536
]
107370163
Exosome [BR:
tut04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107370163
Glycosaminoglycan binding proteins [BR:
tut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107370163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107370163
NCBI-ProteinID:
XP_015793631
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MLQLKLFILSCVITLVYSQVLLPSYSNYNNTKGRCAECVGDKCRCVGQKGARGVPGPQGE
KGSQGERGYPGSYGPQGDKGDKGDLGPAGTRGLKGEPGLTGMPGFPGTDGLMGSQGLPGP
KGLQGPPGCNGTNGSMGPAGDIGLPGPKGMPGPAGDTGPKGEPAYGVPGTKGIKGEPGRD
GRQGDKGRQGPEGRPGPKGEMGLMGPMGYKGDRGYPGPKGERGISITGSMGPPGDKGEKG
LPGPACDRYDGQDRPPTTFIGPKGEKGDKGNKGETGDKGDIGPEGLPGAPGFNGLVGEKG
DKGSIGPQGPPGKVGYPGQIGAPGHKGDMGVAGLPGLEGLPGPRGIKGDKGFPGLPGAVG
APGAPGGIEGRAGPVGDQGPPGPRGPPGSPGLDGPRGQLGPKGSPGPMGGPGAPGPSGLH
GTPGAKGQKGNQGMDGTPGKKGDSGAQGPQGQKGEPGPKGHAGRSIIGPPGRDGTDGSPG
VPGVKGDKGSKGERGIPGDALLGISGPPGDQGPKGDRGYPGMPGNPGRDGDKGDKGDSGK
LCPTCYPGTKGQKGELGPAGDPGIPGRDGNEGKMGEMGIPGEPGPIGIPGPPGANGESGM
PGRDGEKGDKGEPRKLELADMPVGPKGDIGPPGTPGRPGRDGEPGKDGTPGTPGAKGAKG
DKGLPGFPGLQGIVGFTGPVGEKGSRGDKGNSGEKGDKGNLGPEGKKGSTGIKGEPGKIP
TAEELKTMPPGPPGEKGTKGEKGETGPSGLMGRDGVRGDMGPPGLNGEPGVNGAPGAPGE
QGSPGEKGDKGDKGLGGLQGVPGYKGDRGIPGDNGKTGPKGDKGEPGYGIPGAPGLIGLQ
GLKGDKGNPGFKGFIGPMGPPGYPGDKGDIGPPGPPGPFGYQGEKGDLGPPGLLGIDGTP
GTPGAKGDRGPKGDIGMPGSPGYPGWKGAKGDKGIRGNDGRDGQPGPPGVNGTNGVNGVD
GPPGKKGDKGQPGYAGLPGLPGPTGLPGYPGPKGIEGLPGPKGDIGYPGTQGFKGEPGLS
GLPGDKGDIGPQGPPGPPGPMGPMGQRGDKGEPGPRGIGFPGEMGEVGKPGKPGEPCREG
FPGPKGFDGLPGLPGLKGDKGFPGPAGDTGPAGFIGPLGQQGDKGDRGPPGQTVYLSNPG
YDGLPGLEGPKGDRGFPGVPGEKGDKGNQGRNGGNGLPGPIGVKGDQGDPGPMGIPGAPG
LPGFGSRGDKGEPGPPGDRGLPGVSGKDGIPGTPGYKGAQGYPGVKGDKGNKGGQGPPGF
GGMPGLPGPQGPKGDIGLTGPKGDKGFPGIPAIPGLKGMTGIQGPPGPRGSYGDKGDKGD
VGPQGPPGDYILADSLKGDRGFPGAPGEPGDRGLPGLKGEPGLPGFPGQKGERGFPGPPG
PEGKAGRPGDKGMRGPPGRDGLQGQAGYPGDIGPPGPVGMPGPDYLTGILLVRHSQDIKP
PTCPKNMEKLWDGYSLLYIEGNERAHGQDLGFAGSCLKRFSTMPFLFCGLNQACSYASRN
DKSFWLSTNKPIPLRPVKEDAIQDFISRCVVCESPANVMAVHSQTEIYPECPNGWSSLWV
GFSFAMHTAAGAEGGGQSLSSPGSCLEDFRAAPFIECSGARGTCQYFGNKLSFWLATINE
KTQFEKPEGGTFKKEHLRSKISRCSVCIRDLPN
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattaaaattgtttatattatcatgtgtaataactcttgtatactcgcaagta
ttgttgccttcttatagtaattataacaatacaaaaggacgatgtgccgagtgtgtaggt
gataaatgccgatgtgtaggacaaaaaggagctcgaggtgtacccggacctcagggagaa
aagggttcacagggtgaaagaggttatccaggatcttatggaccacaaggggacaaagga
gacaaaggtgatcttggaccagcaggaacaaggggactaaaaggtgaaccaggattaacc
ggaatgccaggatttcctggaaccgatggtttgatgggatcacaaggtcttcctggacct
aaaggattacaaggacctcctggatgtaatggtaccaatggtagtatgggtcctgctggt
gacattgggttaccagggccaaaaggtatgcctggtccagccggagatactggaccgaaa
ggtgaacctgcttacggtgttcctggtactaaaggtataaaaggtgaacctggtcgtgat
ggacgacaaggtgataagggaagacaaggacctgaaggacgacctggaccaaaaggagaa
atgggtttaatgggtccaatggggtataaaggtgatagaggttatcctggaccaaaaggt
gaacgtggcatatccataacaggatcaatgggaccaccaggagataaaggagagaaagga
ttgcctggacctgcctgtgatcgctatgatggacaagatcgtcctccgaccacatttatc
ggaccaaagggtgaaaaaggagataaaggaaacaagggcgaaactggtgacaagggtgac
attggacctgaaggtttacccggagctccaggtttcaatggtttagtgggtgaaaaagga
gataaaggttcgattggtccacaagggccaccaggaaaagttggttacccaggtcaaatt
ggagctcctggtcacaaaggtgatatgggtgttgcgggactgcctggcttagaaggatta
cctggaccaagaggaataaagggagataaaggttttcctggactacctggagcagttggt
gctcctggtgctcctggtggtattgaaggaagagcgggtccagtcggagatcaaggtcca
ccaggaccacgaggacctcctggatcaccaggattggatggcccgcgtggacaattaggt
cccaaaggttcgcctggtccaatgggtggacctggtgcaccaggtccttcaggtttacac
ggtactcctggtgctaaaggacagaaaggtaatcaaggaatggatggtactccgggtaaa
aaaggtgattcaggagctcaaggtccacaaggacagaagggtgaacctggaccgaaagga
catgcaggaagatcgattattggtccaccaggacgtgatggtaccgatggatctcctggt
gtccctggagtcaaaggagacaaaggatcaaagggtgaaagaggaataccaggagatgct
ttattaggtatctctggtccaccaggagatcagggacctaaaggtgaccgaggttaccca
ggaatgcctggaaacccaggacgggatggagacaagggtgacaaaggagattcaggaaaa
ttgtgtccaacttgttatccaggtacaaagggtcaaaagggagagcttggtccggctggt
gatcctggtattcctggacgagatggaaatgagggtaaaatgggtgaaatgggaatacct
ggagaacctggtccaataggtatccctggacctcctggtgctaatggagaatctggtatg
ccaggaagagatggagaaaaaggtgacaaaggagaacctcgtaaactggagcttgctgat
atgccagttggacctaaaggagatattggtcctcctggaactcctggtagaccaggtaga
gatggagaacctggtaaagatggtacaccaggaacaccaggagcaaagggtgccaagggt
gataaaggattgcccggtttccctggtttacaaggaattgtcggttttaccggtccagtt
ggagagaaaggttcaagaggagataaaggaaattctggtgagaaaggagacaagggaaat
cttggcccagaaggtaagaaaggaagcaccggtatcaaaggagaaccaggtaaaattccg
acagccgaagagttgaaaacgatgcctccaggtccacccggtgaaaagggtacaaagggt
gagaagggagaaactggcccttcaggactaatgggtcgagatggtgttagaggagacatg
ggaccgcctggattaaatggtgaacctggtgtcaatggagctcctggagctcctggtgaa
caaggttcacctggtgaaaagggtgacaaaggagataaaggtttaggaggattgcaagga
gttcctggatacaaaggagatcgaggtattcctggtgataacggaaaaactggacctaag
ggtgacaaaggtgaacctggttatggcataccaggagcacccggtctcatcggattgcaa
ggtttaaagggagacaaaggaaatcctggattcaaaggattcatcggaccaatgggtcca
ccaggttatcctggagataagggagacattggaccaccaggacctccaggtccatttgga
tatcaaggtgaaaaaggagatttgggacctccaggtttgcttggaattgatggaacacca
ggaactcctggtgctaaaggagatcgcggtcctaaaggtgatattggaatgcctggttct
cctggttatcctggttggaaaggggcgaaaggagataaaggtatcagaggaaatgatgga
agagacggtcaaccaggtcctcctggtgttaatggcactaacggagttaacggtgtcgat
ggtccaccagggaaaaagggagataaaggacaacctggttacgctggacttccagggctt
cctggtccaactggattacccggttatcctggacccaaaggaattgaaggtctgcctgga
ccaaaaggagacattggatatccaggaacacaaggattcaaaggagaacctggtttaagt
ggattacctggagataaaggtgatatcggacctcaaggtccaccaggacctccgggacca
atgggtccaatgggtcaaagaggtgacaaaggagaacctggacctcgtggtatcggcttt
cctggtgaaatgggtgaggttggtaaacctggtaaaccaggagaaccttgtcgtgaagga
ttccctggtcctaaaggatttgatggacttccaggtttgcctggattaaaaggtgacaaa
ggattccctggtccagctggagatactggtcctgctggttttattggtccattgggtcaa
cagggagacaagggtgaccgaggtcctcctggtcaaaccgtatatctatccaatccagga
tacgatggtttacctggacttgaaggtccaaaaggagatcgtggtttccctggagtacct
ggtgaaaagggagataaaggaaatcaaggtagaaacggtggtaatgggttgcccggtcca
atcggtgtaaaaggtgatcagggagatcctggtccaatgggaattcctggagctcctgga
ttaccaggatttgggtctcgtggtgataaaggagaacctggtcctcctggtgatcgtggt
cttcctggtgtatcaggaaaagatggaattcccggtactcctggttacaaaggtgcccaa
ggctatcctggagttaaaggagataaaggaaataaaggaggtcaaggtccacctggattt
ggtggaatgcctggactacctggtccacaaggtccaaaaggtgacatcggattgacagga
ccaaaaggagacaaaggattccctggtataccggcaattcctggacttaagggaatgact
ggtattcaaggacctcctggacctcgtggatcttatggtgacaaaggtgacaagggtgat
gttggacctcaaggaccacctggagattacattttagctgattctcttaagggtgatcgt
ggtttccctggtgctcctggagaacctggagatcgaggcttacctgggttaaagggtgaa
cctggattacctggtttccctggacaaaaaggagaacgtggattcccaggacctccagga
ccagaaggaaaagccggaagacctggtgataaaggaatgagagggcctcctggacgtgac
ggattacagggtcaagctggttatcctggtgacattggaccaccaggtcctgtcggtatg
cctggaccagattacttgacgggtattctgttggttagacactctcaggacatcaaacca
ccaacgtgtcctaaaaacatggagaaactttgggatggttacagtttactctatattgaa
ggaaatgaacgtgcccatggtcaagatctcggttttgcgggttcatgtttaaaacgtttc
agtacaatgcctttcctattctgtggccttaatcaagcttgttcatatgcctctcgaaat
gataaatcattttggttatcaactaataaacccattccgctgagaccggtcaaagaggat
gctatacaagattttattagccgttgtgttgtttgtgagtccccggccaatgtgatggct
gttcattcccagactgaaatttaccctgaatgtcctaatggctggagttcattgtgggta
ggtttttcatttgcaatgcacactgcggctggagctgaaggtggaggccaatctctttct
tcaccgggaagttgccttgaagatttcagagcggcaccattcattgagtgcagtggagct
cgaggtacatgtcaatattttggtaataaattgtctttctggttggcgacaatcaatgag
aaaacccaatttgaaaagcctgaaggaggaacatttaaaaaggaacatttacgatccaaa
ataagtagatgttccgtttgtataagagatctacctaattga
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integrated database retrieval system
