Tetranychus urticae (two-spotted spider mite): 107370278
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Entry
107370278 CDS
T04901
Name
(RefSeq) helicase sen1 isoform X1
Organism
tut
Tetranychus urticae (two-spotted spider mite)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
AAA_19
Viral_helicase1
AAA_30
ResIII
Yop-YscD_cpl
DEAD
SLFN-g3_helicase
UvrD-helicase
AAA_22
AAA_25
UvrD_C_2
AAA_16
Rad17
NPHP3_N
T2SSE
nSTAND_NTPase5
CEP135_TSGA10_CC
DUF6434
nSTAND3
Arm-DNA-bind_2
AAA
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
107370278
NCBI-ProteinID:
XP_015793754
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MIQLNCDQMIRLKGARGDGASPFDVILEKEATLGRSKQSKIPLVSLYISRSHCKFEKENN
VWYLTDLKSFNGTYLNGERLPPHKRSAIKYGDKIRLSFPVQGDDCCFELQVMKPSNANEK
SIEVKKEKINEKPNVSIVTSTPKTKTPDTENVIVIQDNAVDSCFDPVVESPRRTKILETK
RAKDLKMHYLKQKLARSANDNFNKNKTKTGGLKKQVAASYGNRIPIPGGGSARVIPSTNK
PEITILSTKPKQPGSVQPAPKIKIEKDESKKSSLDIDCINLVGDAPTVKRQPVPTNVSNR
SNRVTSLVESIIAAQKNNVNIKPGQTNRPKTTISKVSEEPSVSDTTKSAESGAASKSTET
GSVSKPVPNKRPVPESVPNKATNPSKKVKISDGGIAQMIAEKRSKHDNITVSPMKPLGPP
PTTSKKTNQIPQPTSSVLQNHISLLPKELQVKNFSTDNVLLKILEWSVQWIRESKTLSNK
PPPITDKPLIKLSLSYSSWQKYYDTYEPLVLHEIWSQIMQSYESEKQSNVLMVAVSSYEL
IDGFLKLDCQATMLPSDFRDQLYLNEGDLALVELQSESCEKRVVFGYIETMISEDITDRT
PILRTYRVPPGHRIFLKYQIKIKFRQVKLDCASLMRVRSIYYLKPLLRNIEAILALQNSK
LCEDILSPRMVTCQMAVPSIKFSNPDYNESQLKAILASVEAVQRPYTMPKLLMIQGPPGT
GKTTTLVGIIKKIFETWEESNSPPKVLVCAPSNGAIDEIARRLHSARHFLTSTQWKRPLR
CVRVGMPNQMHPSVRKMSLDELVTENISRQKSDHQRGIQEKIDNLERDVACKDRLVADYR
AKNDKNNVDRCLSEMFICNREIEFLRKELKNNNEQMNDINKKKSLRADILKKADVVLSTL
NSCRQSLLEGLYLTDRDPCQFNCVIIDEASQCCEPEILMPLTYTSISKMILIGDPMQLPA
TVISPVASEYHYDRSLFERFFHHFGGYSSSSPVLMLDTQYRMHSSICSFPSKKFYSNRLK
TAPDLDKRPFPLKPYLIIDLKGTTFDQSNFKNIHNELEADFVINLYSAVREICHRDTTVG
IITPYQGQKKLLSNKLEKNYPNVDVNTIDGFQGQERDVIIISLVRDFSKRDCGIGFLGSA
NRLNVALTRARHSLIICISDISDVNNDLWKSLVDNAASRKLLLKTSCRVKNGLKNLIKAE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgatacaattaaattgtgaccaaatgattcgtttgaaaggagcacgtggtgatggagca
tcgccttttgatgtcattcttgaaaaagaagcaactcttggtcgatcaaaacaatccaaa
attccactcgtttctctttatattagccgttctcattgtaaatttgaaaaggagaataat
gtctggtatctcaccgatttaaaaagtttcaatggtacctatctgaatggtgaacgtttg
cctccgcacaaaagatcagcgatcaagtatggagataagattagattgagttttccagtc
caaggagatgactgttgtttcgagttgcaagttatgaagccatctaatgccaatgagaaa
tctattgaagttaaaaaagaaaaaataaacgaaaaacctaatgtaagcatcgtgacctcc
acccctaagactaagactccggatactgaaaatgttattgtcattcaggataatgctgtc
gattcctgttttgaccctgttgtagaatcgcctaggaggactaaaatactggaaacaaaa
agagctaaagacttgaaaatgcattaccttaaacaaaaactagctagaagtgcaaatgac
aactttaacaagaacaaaaccaaaactggtgggctgaaaaaacaagttgccgcatcctat
ggtaatcggattccgattcctggtggtggctccgctcgtgtcatcccctctaccaacaaa
cccgagataacaatcctatccactaaaccgaaacaacctggttcagtgcagcctgcgcct
aaaattaaaatagaaaaagacgaatctaaaaaatctagtcttgatatagattgtataaat
ttagttggtgacgcgcctacggtcaaaaggcaaccagttccgactaatgtgtcaaatcgc
agtaatagagttacatctcttgttgagtccataattgcagctcaaaagaataatgttaat
attaaacctggacagactaacaggccgaagactaccatttctaaagtaagtgaagaacca
tccgtttctgatactactaaatcagctgaatccggagctgcatctaaatcaacggaaact
ggaagtgtatctaaacctgtgcccaacaaaagacctgtgcctgaaagtgttcccaacaaa
gctactaatccatctaaaaaagtcaaaatttctgatggaggaatcgcacaaatgattgct
gagaagcgaagtaaacatgataatatcacggtcagcccaatgaagcctttaggaccacca
ccaaccacatctaaaaaaactaaccaaatacctcaaccaacttcatctgtattacaaaac
catataagtttgcttccaaaagaattgcaggtcaaaaatttttctactgataatgtactt
ttaaaaattctcgaatggagtgttcaatggatcagggagagcaaaacattgtccaacaaa
ccacctcctattacagataaacctctcattaaattgagtttatcttattcaagttggcaa
aaatattacgatacttatgagccattggtgcttcacgaaatctggtctcaaattatgcaa
tcttatgaaagtgagaagcaatctaatgttctaatggtagctgtctctagctatgaactc
atcgatggttttctcaaacttgactgtcaagctacaatgcttccttcagactttcgtgat
caattatatttgaatgaaggagatttagctttggtcgaattacaatctgaaagctgtgaa
aaaagagtcgtttttggatacatcgagacaatgatttcagaagatattactgataggacg
ccaattctacggacttatcgagtgcctcctggtcatagaattttcttaaaataccagata
aaaataaagttccgccaagtgaaattggactgtgcttctctgatgagagtcagaagtata
tactacctcaagccattgcttagaaatattgaagccattttagctcttcaaaattccaag
ttgtgtgaagacattctttcgcctaggatggttacttgtcaaatggctgttccatctatt
aaatttagtaatcctgactataacgagtcccaactgaaagccatcttagcatctgtcgaa
gctgttcaaagaccttacactatgcctaaattattaatgattcaaggtcctccaggaact
ggtaaaacaacaactctggtaggaataatcaaaaaaatattcgaaacttgggaagaatct
aattctccacctaaagttttggtctgtgctccttcgaatggagcgattgatgaaattgcc
aggcgacttcacagtgctcgacattttttaacctcaactcaatggaaaagacctttaagg
tgtgttcgtgtcggaatgcccaatcaaatgcatccctctgttcgtaaaatgtcattagat
gagttggttactgaaaatatctcaagacaaaagtctgatcaccaacgtggtattcaagaa
aagattgataatctggaaagagatgttgcttgtaaagaccgtctagttgctgactatcgc
gctaaaaatgataaaaataatgttgatagatgtttatcagaaatgtttatttgcaatcga
gagattgagttcttaagaaaggaattgaaaaacaataatgagcaaatgaatgatatcaac
aagaaaaaaagtcttagagctgatatcctcaaaaaagctgatgtcgttttgtcaacttta
aacagctgtcgtcaatcgttgctagaaggattatatcttactgatcgagatccttgccaa
tttaattgtgtcattattgatgaagcctcgcaatgttgtgaacctgagattttgatgcct
ctcacttatacctcaatttcaaaaatgatcctcattggagatcctatgcagcttccagct
actgtcatctctcctgttgcctcagaatatcattatgatagatctttatttgaaagattt
ttccatcattttggtggttattcatcttctagtccagtattgatgcttgatactcaatat
cgtatgcactcttcaatatgctcttttccatcgaaaaagttttacagcaatcgtttaaag
actgccccagatctcgacaaaagaccttttcctctcaaaccttatttaattattgatctt
aaaggcaccacctttgatcaatccaatttcaaaaatatccacaatgaactggaagccgat
tttgttattaacctgtattcagctgttcgagaaatttgtcatcgtgatacaacagtgggt
attattacaccgtatcaaggacagaaaaaattattgtctaataaattggaaaaaaattat
cccaatgttgatgtcaacacaatcgatgggtttcaagggcaagaaagagatgtcattatt
atttctttggttcgtgatttttccaagcgcgactgtggcatcggttttctcggctcagct
aatcgtttaaatgttgcacttacccgagctcggcattcattaataatttgtatatcagac
atttcagatgtaaataacgatctatggaaaagtttagtagataacgccgcttccagaaaa
ttgcttcttaaaacttcatgtagagtcaaaaatggactcaaaaacctaatcaaggctgaa
tga
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