Tetranychus urticae (two-spotted spider mite): 107371484
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Entry
107371484 CDS
T04901
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107371484
03036 Chromosome and associated proteins [BR:
tut03036
]
107371484
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107371484
Chromosome and associated proteins [BR:
tut03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107371484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
HHH_9
S1
Tex_YqgF
SH2
HHH_3
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
107371484
NCBI-ProteinID:
XP_015795063
UniProt:
T1JXX7
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MSSFLENEAEESDNDYDSDEVARHPRKKRAKPTQDSEEEEEEDDEEALRNEMKDLINDEE
EEEEGESDDDDDEEGGKKRSRDEEESEEDLDDDDLDLLEENLGVKLSRKKKFKRVRRLID
EESDDEGEKDEREAIANELFDDEDGEQRPKNDRRRRGDEEEDDRYRALSGSEESDDEGNF
IVDDNDEPISRPRKKKGYRYNDEAMQQAQDVFGVEFDFDDFQNYGVEDEYEDEQDDEYEE
EEEDDGEGGARIRKKSKAKKKSSRKSIFEVYEPAELEKSFLQEQDKKITTADLPERFQLR
STPVTPADDGEIDEEADWIYSNAFSQPTITIQIQDAAQQAGRSLERGPLAGKKPPTAVPK
IRETLKFIRNQSREVPFIQFYRKEYVRPELEIDDLWTIYKWDEKWCQLLQRKANMKKLVL
DMQRYQGDLIIADPDAPLPEGARIIGDADIERIDRVNSFDELRDCWVQFQLYYGSLFPAM
KQAKAEAERKRRLESRLEGGEEGDQVHEEEDVIKDKMSSLKLIQRKDFYTVCQEAGILGL
ATRFGLTPEQFGENLRDAYQKYEVEQIPIEPEEFANDYICTRFPDVEAVLKAAKYMVARQ
LASDPIVRKVTRQVFFERAVIHVKPTKKGMKEIDESHPCFTYKYLRNKPVSEFSNEQFLH
LVIAKQEGNVTVKITMDKANVKGKDPNPTYFDEIKALYQRDEFSSNVQKWNKLRLEALET
ALDKFLYPSFEVELIAKLTKESQEGVIKRASKKLYDWLKIGPYVPNPEVTEDEDFDIREG
LRVLGFAYAPQDESPSFAVLVDGDGEVVEHLRLPNFMLRRTVYATEKEKDLREKDKERLK
NFILDKKPHVICVGSKDLTARYLIDEIMTMAQELHDEENIPVIPVTLLDDELSTVYMNSK
RAMAEFHDFPPVLRQAVSLARRLQDPLIEFSQLCTADEEILCMKYHSLQDHVPKDELLSS
LQQEFIYRVNEVGVDINRILVHNYTSQLLQFVCGLGPRKAAALVRNLKKSPTPLLETRTQ
LMVNCGIGEVVFQNCAGFIKLDTAQLSDTGTETYIEVLDSTRIHPEAYDLARKMAIDALE
YDETNELPSAGALEEIMENPENLKDLDLDAFAEQLAKEGCGNKKITLYDIREELNHPYKD
LRQTYKLTAEDSFHLLTKESPETFYVGKLIIGTVINVYRRKPLQGSTDENNPVRNDETGL
WMCPVCKKNDFDELNEVWNHYDAELCPGQAMGVRVRLDNGLVGLVPIEKISDHEVINPDE
RVKPGMTVHARITKVVADKYFLEMTCRTSDLNDRSYHWRPPKDFYYDFDAEDEDFKEEED
KKKKKAGKQNIYKRIIVHPSFHNIDFKQSEQMLESMHQGEAIFRPSSKGPDHLTLTWKVA
DGIYQHIAILEKNKDNAFSLGHQLIIDGEIYEDLDEIMARYITPMASFAREITSFRHFKG
SVMGNKREAEKILLEEKKKRNTIVYIISASKDFPGKFLLSYPNKEGKVIHEWLSIKPIGF
KYREEYFRRLKDVIKRFQENWFTGKSLATPLLSAPSQMSHQQLTSPAPGLRFPTPQGTPV
MASPFHVPSSAAAAAAAWNRASTSMPPPRRTPTQQRTPSSMPPPPDPWVKLVQPGTPSHA
TPGASSQMSISPSYSPANKGDATPLLDEWA
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttcttgaaaacgaagctgaagagtcagataatgattatgattcggatgaa
gttgcacgacatcctcgtaaaaagcgtgccaagccaacccaagattccgaagaggaagag
gaagaagatgacgaggaagcccttagaaatgaaatgaaagacttgatcaatgacgaagaa
gaagaagaagagggtgaatcagatgatgacgacgatgaggaagggggcaaaaaaagaagc
agagatgaagaagaatcggaggaagatctcgatgatgatgatttggatctgcttgaggaa
aatttgggtgtaaaattatcacgaaagaagaaattcaaacgtgttcgtcgtctgattgat
gaagaatctgatgatgaaggtgaaaaggatgaaagagaagccatcgctaatgagctattt
gatgacgaagacggtgaacaaaggcctaagaatgatcgccgacgccgaggtgatgaagaa
gaagatgatcgttacagggctttatctggctcggaagaatccgatgatgaaggtaatttc
attgtcgatgacaatgatgaaccaatctcgcgaccaagaaaaaagaaaggttaccgatac
aatgatgaagccatgcagcaagctcaagatgtttttggagttgaatttgatttcgatgat
ttccaaaattatggtgttgaagacgagtacgaagacgaacaagatgacgaatatgaagaa
gaagaggaagacgacggagaaggaggagctcgaatcagaaagaaaagtaaagcaaagaaa
aaatcctcgcgtaaatcaatttttgaagtctacgagccagctgagcttgaaaaaagtttc
cttcaggagcaggataaaaaaattaccacagctgatttacctgaaagattccaactacga
agtacccctgttactccagctgatgatggagaaatagatgaagaagctgactggatctat
tcaaatgcgttctcacagcctacaattactatacaaattcaagatgcagctcagcaagct
ggtcgatcgctagaaagaggaccacttgcaggtaaaaagcctccaacagctgtaccaaag
attagagaaactctcaaattcatcagaaatcaaagccgtgaggttccattcatccaattt
tatagaaaagaatacgttcgaccagaattagagattgatgatttatggacaatctataaa
tgggatgaaaagtggtgtcaacttttacagcgaaaagctaatatgaaaaaattagtactg
gatatgcaaaggtatcaaggagatttaattatcgctgatcctgatgctcctttaccagaa
ggtgctagaattattggtgacgctgacattgaacgtattgatagagtgaatagcttcgac
gagctcagggactgttgggtccaatttcaactttactatggatctctgtttccagctatg
aaacaagctaaagctgaagcagaaagaaaaaggcgacttgaatctagacttgaaggcggt
gaagagggtgatcaagtgcatgaagaagaggatgtaattaaagataagatgtcatctctc
aagttgattcaaagaaaagacttttacactgtttgtcaagaagcaggaattttaggactg
gccacaaggtttggtttaactccagaacagtttggtgaaaatcttcgtgatgcttatcaa
aaatatgaagttgagcagatacctatagaacctgaagagtttgctaatgattatatctgt
acaagatttcctgatgtggaagcagttcttaaagcagctaaatacatggtagctcgacag
ttagcttctgatcctattgttcgtaaagttactcgtcaagttttctttgaaagagctgtt
attcatgtcaaacctaccaagaagggaatgaaagaaattgatgagagccatccctgtttt
acctacaaatatttacgtaataagcctgtttctgaattttccaacgaacaatttttacat
ctggtaatcgctaaacaagagggcaacgtaactgtaaaaataactatggataaagcaaat
gttaaaggaaaagacccaaatccaacttatttcgatgagattaaagctctttatcaacgg
gacgaattcagcagcaatgtacaaaaatggaacaaacttagactcgaagcacttgaaact
gcactagataaatttctctacccgtcgtttgaagtcgagcttatcgctaagctaaccaaa
gaatctcaagagggagttataaagagagcttctaaaaagctttatgattggctaaaaatt
ggaccttatgtcccaaatccagaagtaactgaagatgaagattttgacattcgtgaaggt
ttacgagttctcggatttgcctatgctcctcaagatgaaagtcctagttttgctgttcta
gtggatggtgatggagaagtagtcgaacatcttaggcttcctaatttcatgttgagaaga
acagtgtatgcaaccgaaaaagaaaaagaccttcgagaaaaagataaagaaaggttgaaa
aattttattctcgacaaaaaaccgcatgttatttgtgttggttcaaaagatttgacagcc
agatatcttattgatgaaataatgacaatggctcaagaattacacgacgaagaaaatatt
ccggttattcctgtaaccctgctcgatgatgaactttcaactgtatatatgaactctaaa
cgtgccatggctgaatttcacgattttccaccagtccttcgtcaagctgtttccctagcc
agaagactccaggatccgcttattgaattctcacaactctgtactgctgatgaagaaatt
ctttgtatgaagtatcattcacttcaagaccatgttcctaaagatgaattactttcaagt
ttacagcaagaattcatttacagagtgaatgaagttggagttgatatcaaccgaattcta
gttcataattatacatctcaattactacaatttgtttgtggactcggtccgagaaaagca
gccgctttagtaaggaacttgaaaaaatcaccaactccacttttagaaacaagaactcaa
ttaatggtgaattgtgggatcggtgaagttgttttccaaaactgcgctggatttattaag
cttgataccgctcaactcagtgatactggaactgaaacatacattgaagttttggatagt
acaaggattcatccagaagcttacgatctggctagaaagatggctattgatgctttagaa
tacgatgaaaccaatgaacttccatctgctggtgctttagaagaaattatggaaaatcca
gaaaacctgaaagatcttgacttagatgcattcgctgagcaattagcaaaggaaggatgt
ggtaacaaaaaaattacattgtacgatattagagaggaattgaatcatccatacaaagat
ttaagacaaacttataagttaaccgctgaagattcattccatcttttaaccaaagagtct
cctgaaactttttatgttggtaagctaattattggaacagttatcaatgtatatcgtcgt
aagcctttacaaggttcaactgatgaaaacaatccagttcgtaacgatgaaactggtctc
tggatgtgtccagtttgtaaaaagaatgattttgatgaattgaatgaagtatggaatcat
tatgatgctgaactttgtccgggtcaagcaatgggagtgagagtaagattagataatggt
ttagttggcctggtgccgattgaaaaaattagtgaccatgaagtaatcaacccagatgag
cgtgttaaaccgggaatgacggttcatgctcgaataaccaaagttgtcgctgataagtac
ttccttgagatgacttgccggacatcagatcttaatgataggtcttatcattggcgtcct
cccaaagacttttattatgattttgatgctgaagatgaagatttcaaagaagaggaagat
aaaaagaagaaaaaggctggaaagcagaatatttataagcgaatcattgttcatccctct
ttccataacatcgatttcaaacagagtgaacaaatgttagaatcaatgcatcaaggagaa
gcaatattcagacctagttctaaaggcccagatcacttgacacttacttggaaagttgct
gatggtatctatcaacatatagcaattttagaaaaaaacaaggacaatgcttttagtctt
ggtcatcaattaattatcgatggagaaatttatgaagatcttgatgaaattatggccagg
tatattacaccaatggctagtttcgctagagaaataacatcattccgacattttaaagga
agtgtaatgggaaataaaagggaggcggaaaaaatcctcctcgaagaaaagaaaaaaaga
aacaccattgtttatataatttctgccagtaaagattttcccggaaagtttcttctttct
tatccaaacaaagaaggaaaggtaattcacgagtggctctcgattaaacccataggattt
aagtatagagaggaatattttagacgattaaaagatgtgattaaaaggtttcaagaaaat
tggtttactggtaaatctctggcaactcctcttttaagtgctccatctcaaatgtcacac
caacaattaacatcacctgccccaggattaagattcccaacaccacagggtactccggtg
atggcttcacctttccatgtaccttcaagtgctgcggcagctgcagctgcttggaataga
gcatcaacaagtatgccacctcctcgacgaactccaactcagcaacgaacacccagttca
atgcctccaccgcctgatccttgggttaaacttgttcaacccggtactccatcacatgct
actcctggagcttcgtcccaaatgtcgatcagtccatcatattcacctgcaaataaaggt
gatgctacaccacttttggatgaatgggcttga
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integrated database retrieval system
