Thermoproteus uzoniensis: TUZN_0090
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Entry
TUZN_0090 CDS
T01460
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tuz
Thermoproteus uzoniensis
Pathway
tuz03022
Basal transcription factors
tuz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tuz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TUZN_0090
09124 Replication and repair
03420 Nucleotide excision repair
TUZN_0090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tuz03021
]
TUZN_0090
03036 Chromosome and associated proteins [BR:
tuz03036
]
TUZN_0090
03400 DNA repair and recombination proteins [BR:
tuz03400
]
TUZN_0090
Enzymes [BR:
tuz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TUZN_0090
Transcription machinery [BR:
tuz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TUZN_0090
Chromosome and associated proteins [BR:
tuz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TUZN_0090
DNA repair and recombination proteins [BR:
tuz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TUZN_0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_30
PhoH
AAA_25
PRIMA1
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AEA11593
UniProt:
F2L144
LinkDB
All DBs
Position
85788..87548
Genome browser
AA seq
586 aa
AA seq
DB search
MERFFPYDDFRPFQRELAVAILDGFRSGRVVLANAPTGLGKTAAALAAALTYAEEAGAKV
LYLVRTKNEMLQPLKELARLRARGVEVRYAFLRNKQDMCCYKELRGLPYAEFLAECRYLR
GLGKCKYYPPKPFEPETPLAPRSFVKAACEAGTCAYESAKALALWADVVVATYFYAFSPR
AEQWVDLGRTVLVVDEAHSLPDAVASINSVSITEAEVRRARADAEKYGEQEAAASLYKAQ
RGLKELRPGPVSVGDALSLFDEPGQIERAALEVVRRKADEGSTPYSPLVAVAEFLKALRE
GGRYLVLAEESEEGVRLKAVPYDVSRTISAVLGSAKAAALMSGSLPVDLFIKAVPLQRSP
SVFDVPFDKYIGPGNYLAVVDRSVTSKYSARGEEMYKAMARRIAAAVSASPKGVLAVFPS
YDLLKAVRKYLSFNIPLYVEARDTDLEEIELGSKFAVFAVAGGKLAEGVEYVRDGANLLS
TVVIAGVPYPERDYYLDKRVEDLSPGLGPEAAWNAVYLYSAVVKVRQAVGRLFRSPGDRG
ALVFLDHRFLEPDVYVQLKDLLRGAKIVEDEEGLRRELGRFFATSS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtggagcgcttcttcccctacgacgactttaggcccttccagagggagctcgcagttgca
atactcgacggattcagatccggcagagtcgtcttggccaacgcgccgactgggctaggc
aagactgccgccgcgctcgccgccgcgttgacgtatgcggaggaggccggggccaaggtc
ctctacctcgtgaggaccaagaacgagatgttgcagccgctgaaggagctcgcgaggctg
agggcccgcggcgtcgaggtgaggtacgccttcctcaggaacaagcaagacatgtgttgc
tacaaggagttgagaggcctcccatacgccgagttcctcgccgagtgccgctacttgagg
ggtctgggaaaatgcaagtactaccccccgaagccattcgagccggagacgccgctggcg
cctcggtccttcgtcaaggccgcatgcgaggcggggacctgcgcctacgagtcggccaag
gccctggcgctttgggcggacgtagtcgtcgccacgtatttctacgccttcagccccagg
gcggagcagtgggtcgacctcggccggacagtcctcgtagtcgacgaggcgcactccctc
cccgacgccgttgcgtcgataaactcggtctcgatcaccgaggccgaggtgaggagggct
agggcagacgccgagaaatacggcgaacaggaagcggctgcgtcgttgtacaaggcccag
agagggctcaaggagctgaggccgggccccgtgtcggtgggggacgccctctccctcttc
gacgagcctgggcagatagagagagccgcacttgaggtcgtcaggcggaaggccgacgag
gggtcgacgccctactcgccactagtcgccgtggccgagttcctcaaggccttgagggag
ggagggcggtatctagtgctggccgaggagtcggaggagggggtacggctcaaggcggtc
ccctacgacgtgtcgcggaccatatcagccgtgttggggtcggccaaggccgccgcgctc
atgagcggctccctcccagtggacctcttcattaaggccgtgcccctccaacggagcccg
agcgtcttcgacgtgcctttcgacaagtacataggccccggcaactatctcgccgtcgtc
gataggtccgttacgtccaagtacagcgcgaggggcgaggagatgtacaaggcgatggcc
agaagaatagcggcggccgtctcggcctcgcccaagggcgtcctggcggtgttccccagc
tacgacctgctcaaggccgtcaggaaatacctatccttcaacataccgctctacgtggag
gccagggacaccgacctcgaggagatcgagctgggctccaaattcgccgtcttcgccgtg
gcgggagggaagctggccgagggcgtagagtacgttagggacggggccaacctcctatcg
acggtggtcatcgccggcgtgccgtacccggagcgcgactactacctcgacaagagggtg
gaggacctctcgccgggcctgggccccgaggccgcgtggaacgccgtatacctatacagt
gcggtggtcaaggtcaggcaggctgtaggcaggctcttcagatcgccgggcgataggggg
gccctcgtcttcctcgaccacagattcctcgaaccggacgtctacgtccagctgaaggat
ctcctgagaggcgccaagatagtcgaggacgaggaggggctgaggagggagctggggcgg
ttcttcgctacctcttcctga
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