Thermoproteus uzoniensis: TUZN_0478
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Entry
TUZN_0478 CDS
T01460
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
tuz
Thermoproteus uzoniensis
Pathway
tuz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tuz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TUZN_0478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tuz03019
]
TUZN_0478
Messenger RNA biogenesis [BR:
tuz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TUZN_0478
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
TUZN_0478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CNDH2_N
Motif
Other DBs
NCBI-ProteinID:
AEA11974
UniProt:
F2L3B5
LinkDB
All DBs
Position
complement(416140..416877)
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AA seq
245 aa
AA seq
DB search
MKQPPVPLLVEGRRADGRTPDQMREVKISVGVISNADGSAMVSYGNTTAVAAVYGPREMH
PRHLSLPDRAVMRVRYHMAPFSTRDERKNPAPSRREIEISKVLREALEPAIFLEQFPRSR
IDVFVEIVQADGSTRVASLTAASLALADAGVPMRDLVIGVSVGLVNGTVVLDLNGLEDNY
GEGDMPVGYMPNLGRITLLQLDGSWSRDKFAEALKLAIKGAEYVYSKAREALKTKYFEIA
EEVAK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaccgcctgtgcctctgctggtagaaggcaggagggctgacgggaggacgcca
gaccagatgcgtgaggtcaagatatctgtcggcgtcatctccaacgccgacggctccgcc
atggtgtcctacggcaataccacggccgttgctgcagtatacggcccgcgcgagatgcac
ccgaggcacttgtccctgccggatcgcgccgtcatgcgcgtgaggtaccacatggcgccc
ttcagtactagggacgagcgcaagaacccggcgccgtcgcgccgcgagatagagatctcg
aaggtgttgagggaggcgcttgagcccgcgatatttctggagcagttcccgcgttcccgt
atagacgtattcgtcgagatagtccaggcagacggatccacgcgggtggcctcgttgacc
gcggcgtctctcgcgctcgccgacgccggcgtgcccatgagggatttagtgataggcgta
tcggtcggcctagtcaacggcaccgtcgtgttggatcttaacgggcttgaggacaactac
ggcgagggcgatatgccggtcggatatatgccgaacctaggccggataaccctcttacag
ctcgacggctcgtggagtagggataagttcgccgaggccttaaaactcgccataaagggg
gccgaatacgtctacagcaaggcgcgcgaggcgctcaagacaaaatactttgaaatagcc
gaggaggtggctaaataa
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