Thermoproteus uzoniensis: TUZN_0719
Help
Entry
TUZN_0719 CDS
T01460
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tuz
Thermoproteus uzoniensis
Brite
KEGG Orthology (KO) [BR:
tuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tuz03016
]
TUZN_0719
Enzymes [BR:
tuz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
TUZN_0719
Transfer RNA biogenesis [BR:
tuz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
TUZN_0719
Prokaryotic type
tRNA splicing ligases
TUZN_0719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Virulence_fact
DUF5617
Motif
Other DBs
NCBI-ProteinID:
AEA12209
UniProt:
F2L4N1
LinkDB
All DBs
Position
complement(620706..622157)
Genome browser
AA seq
483 aa
AA seq
DB search
MAPPLNKITDYIWEIPKTYKQCMRVPVRVFADSALLEKMKTDMTLEQGANVACLPGIYKY
SIVLPDGHQGYGFPIGGVAAVDAEEGVISPGGIGYDINCGVRVLRTNLTEKDVRPKLKEL
VDEIFKLVPPGVGETGHLKLSVSEFDKAIAEGVEWAISKGFGWPEDKEFIEQKGSWDLAD
PSKVSERAKNRGKDQLGTLGSGNHFLEIQVVDKIFDEKAAKTMGIEQEGQILVMIHTGSR
GFGHQVATDYLMVMERKMREWGLRLPDRELAAAPLRDKVAEDYLKAMAAAANFAWTNRQI
IMHWVREAFRRVFGSIEKVGLEIVYDVAHNIAKLETHEVDDKGTLRKVWVHRKGATRAFP
PGHPEIPAKYREIGQPVLIPGSMGSASWILVGTHDAMKITFGTAPHGAGRMLSREAAIRS
FPPQRVRAELEKRGIIVRSAETEVISEEAPEAYKNVDLVVETAHQVGFAKKVVRQRPIGV
VKG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcctttaaataagatcacggactatatctgggagatacccaagacgtataag
cagtgcatgagggtgcccgtcagggtcttcgccgacagcgccttgctggagaagatgaag
accgacatgactctggagcagggcgcgaacgtggcgtgcctccccggcatatataagtac
agcatagtcctgcccgacggccatcaaggctacggattccccataggcggcgtcgccgcg
gtggacgcggaggagggcgtcatatcgccgggcgggatagggtacgacatcaactgcggc
gtgagggtcctacggacaaacttgacggagaaggatgtgaggcctaagctgaaggagctc
gtggacgagatattcaagctggtgcctcccggcgtcggcgagacaggccatctgaagctc
tccgtctcggagttcgacaaggcgatcgccgagggcgtcgagtgggccatatccaagggc
ttcggctggcccgaggacaaggagttcatcgagcagaaggggtcttgggacctcgcagac
ccgagcaaggtgtcggagagggccaagaacagggggaaggaccagctgggcactctcggc
tccggcaaccacttcctcgagatacaggtcgtcgataagatattcgacgagaaggccgct
aagaccatgggcatagagcaggagggccagatactcgtcatgatacacacggggagcagg
gggttcggccaccaggtggccaccgactacttgatggtcatggagaggaagatgagggag
tgggggctgagactgccggaccgcgagctggccgcagcgccgctgagggataaagtcgcc
gaggactatctgaaggccatggcggccgccgcgaacttcgcctggacaaacaggcagata
atcatgcactgggtcagggaggccttcaggagggtcttcggttccatagagaaggtcggc
ctcgagatagtgtacgacgtggcccacaacatagcgaagctggagacccacgaggtggac
gacaagggcactctcaggaaggtctgggtgcaccgcaagggcgccacccgcgccttcccg
ccgggccatcccgaaataccggccaagtatagggagataggacagcccgtgttgataccg
ggctccatgggcagcgcctcctggatactcgtgggcacccacgacgccatgaagataacc
ttcgggacggccccccacggcgccggccgcatgctcagcagagaggccgccataaggtcg
ttcccgccgcagagggtcagggccgagcttgagaagagaggcataatagtcaggagcgcc
gagaccgaggtcataagcgaggaggccccggaggcctacaagaacgtcgacctcgtcgtc
gagactgcccaccaggtcggcttcgcgaagaaggtcgtcaggcagaggcccataggcgtc
gtcaagggctga
DBGET
integrated database retrieval system
