KEGG   Thermoproteus uzoniensis: TUZN_1611
Entry
TUZN_1611         CDS       T01460                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tuz  Thermoproteus uzoniensis
Pathway
tuz03030  DNA replication
tuz03410  Base excision repair
tuz03420  Nucleotide excision repair
tuz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tuz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TUZN_1611
   03410 Base excision repair
    TUZN_1611
   03420 Nucleotide excision repair
    TUZN_1611
   03430 Mismatch repair
    TUZN_1611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tuz03032]
    TUZN_1611
   03400 DNA repair and recombination proteins [BR:tuz03400]
    TUZN_1611
Enzymes [BR:tuz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TUZN_1611
    6.5.1.6  DNA ligase (ATP or NAD+)
     TUZN_1611
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     TUZN_1611
DNA replication proteins [BR:tuz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TUZN_1611
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TUZN_1611
DNA repair and recombination proteins [BR:tuz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TUZN_1611
   NER (nucleotide excision repair)
    Other NER factors
     TUZN_1611
   MMR (mismatch excision repair)
    Other MMR factors
     TUZN_1611
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AEA13078
UniProt: F2L2N0
LinkDB
Position
1400276..1402060
AA seq 594 aa
MEFSELAKVLASIESTTQRTTMVRLLVGLFKKLEPAEIDKAIYIILGDLRPPWEGLELGV
GEKLCIRAIARASGAKADEIEELYKKTGDMGEAARRALSRRQAQTLLAFAGGRKAGLSIS
QVYDTLFKVAKASGEGSQDLKISLLSSLFSQLSPDEAKYVARFVVGRLRLGVADMTVIDA
LAEAFGVPEEALERAYNVRPDLGFLGKLVAERGAAGLAEVRITPGVPVMPMLAQRLSTSR
EILAKLGGAAICEYKYDGERAQIHVSPDGVAIYSRRLENITHAYPDVVESVRKSVSAREA
VLEGEIVAVDPDTGDLLPFQELMHRKRKHEVEEAVKEYPAKLNLFDLLYLDGEDLTDKPL
MYRRLKLSEIVEEGEDVVIAKWALFDDEEKVDVFFHEAISMGMEGLVCKSPTSVYEMGAR
GWNWIKYKRDYRSEMSDTVDLVVVGAFYGRGKRAGLYGAFLTAAYDPKTDTFYTVCKVGS
GFTDADLKKMYQMLEPYKIDHRHPRVSSRMEPDVWFTPGVVLEIIGAEITLSPLHTCCLG
AVRPDVGLAIRFPRFTGRYRTDKSPEEATTVDELLEMYKSQKKVKVEQGPEAAP
NT seq 1785 nt   +upstreamnt  +downstreamnt
gtggagttctcggagctggccaaggtgctcgcctcgatagagtcgactactcagaggacc
acaatggtgcggcttctggtgggactattcaagaagctggagccggccgagatagacaag
gcgatatatatcatattgggcgatctgaggcctccttgggagggcctggagctcggcgtc
ggcgagaagctgtgcataagggccatcgcgcgggcctcgggcgccaaggccgacgagata
gaggagctttacaagaagacgggcgacatgggggaggcggcgaggagggccctctccaga
cgacaggcccagacgttgctcgccttcgcggggggcagaaaggccggcctatccatatcg
caggtctacgacacgctttttaaggtggccaaggcctccggcgaggggtcgcaggaccta
aagatatcccttctctcgtcgctcttttcccagctctcgcctgacgaggccaagtacgtg
gcccgctttgtcgtgggccgcttgaggctgggcgtggccgacatgacggtgatagacgcc
ttggcggaggccttcggcgtgccggaagaagccttggagagggcttacaacgtaaggccg
gatctgggcttcctcggcaagttggtggccgagaggggggcggcggggcttgcggaggtg
aggataacgcccggcgtgccggttatgcccatgttggcccagcgcctcagcacgtcgagg
gagatcttggccaagctggggggcgccgccatatgcgagtacaagtacgacggggagagg
gcccagatacacgtatcgcccgacggcgtggccatatacagcaggaggctcgagaacata
acccacgcctatcccgacgtcgtggagtccgtgaggaagtccgtgtcggccagagaggcc
gtgctcgagggcgagatcgtggcggtggatcccgacacgggcgacctgttgccgttccaa
gagctcatgcaccgcaagaggaagcacgaggtggaggaggccgtcaaggaatacccggct
aagctcaacctcttcgacctgctctacctagacggcgaggacctcacggacaagccgctt
atgtacaggaggcttaagctgtcggagatagtcgaggagggggaggacgttgtcatagcc
aaatgggccctcttcgacgacgaggagaaagtcgacgtgttcttccacgaggccatatcg
atgggcatggaggggctggtctgcaagagccccacctccgtctacgagatgggggccaga
ggctggaactggataaaatacaagagggattaccgcagcgagatgagcgacacggtggac
ctcgtcgtcgtgggggccttctacgggaggggcaagagggcgggcctctacggcgccttc
ctcacagccgcctacgaccccaagacggacacgttctacacagtttgcaaggtggggagc
gggttcacagacgccgatttgaagaagatgtaccaaatgctggagccctacaagatagac
cacagacacccgagggtctcgtccaggatggagcccgacgtctggttcacgcccggcgta
gtccttgaaatcataggggcggagatcacgctgtcgccgctgcacacttgttgcctaggc
gccgtgaggcccgacgtcggcttggcgatacgcttccccagattcacaggcagatacagg
acggacaaatcgccggaagaggcgacgaccgtcgacgagctcctggagatgtacaagagc
cagaagaaggtcaaggtggagcagggcccggaggcggcgccttaa

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