Trichomonas vaginalis: 4744593
Help
Entry
4744593 CDS
T01022
Symbol
TVAGG3_0378760
Name
(RefSeq) RNA binding
KO
K13126
polyadenylate-binding protein
Organism
tva
Trichomonas vaginalis
Pathway
tva03015
mRNA surveillance pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4744593 (TVAGG3_0378760)
09123 Folding, sorting and degradation
03018 RNA degradation
4744593 (TVAGG3_0378760)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4744593 (TVAGG3_0378760)
03041 Spliceosome [BR:
tva03041
]
4744593 (TVAGG3_0378760)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4744593 (TVAGG3_0378760)
mRNA cycle factors
Stress granule specific factors
4744593 (TVAGG3_0378760)
Spliceosome [BR:
tva03041
]
Complex C
Other components
Complex C specific factors
4744593 (TVAGG3_0378760)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_Nup35
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
4744593
NCBI-ProteinID:
XP_001299877
UniProt:
A2G7C0
LinkDB
All DBs
Position
V:<21537710..>21539281
Genome browser
AA seq
485 aa
AA seq
DB search
MFQSEAVIYISDIPATYTEDKMREIFSKYGEIEQILLRKYRSVDFQYSFIQYKAKEQAEK
AFDEANFMRLETSSIFIQFMSPKIRQLRFSSDNAVLISGVSPETTNKSFYDKYKSFGKII
FSYLVQNKGYGYIQYETKKAAKAATESDANITNYTYKPLAKAFQEVVVNDVSEEAFPGIK
SLFEKLGEIKNIEKVDKSYYIRFADHKAADSAFLFFNMCIVGSSIVKVDMSPRETDYFHY
YLLEAATHMGDEDSFVKVALKNLPNTVTCGQHVREICEKYGAVQAPRLNLNEKWESLGTA
TCTMMSHQDALNVIEGLKRDNSQIIAARSMSIDEAKLYKEVSDLKIYRDQTNSSKDRQFL
VTEPKELKLIKDEFKSAMRVDLCGSLALVMFKTTELMDAAVSNYNGKFGSLLFFEKVDSM
ALPPLGKSWPPQQRFPFRNNVRDRFMRKVLAMRPDFNENKFKDVTPEVARFLLGHEKVMN
AWLDE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaagcgaagcagtaatttacatttccgatataccagcaacatacactgaagac
aagatgcgtgaaatcttcagcaaatatggtgaaattgaacaaattttacttcgtaaatac
cgttctgttgatttccaatacagtttcatacaatataaagctaaagaacaggctgaaaag
gcatttgatgaagccaatttcatgagacttgaaacaagcagcattttcattcaatttatg
tcaccaaagatacgccaattacgcttttcttccgataatgctgttttaatatcaggtgtt
tcaccagaaacaaccaacaaatcattctatgataagtataaatcctttggcaaaattatt
ttctcgtatttagttcagaacaaaggatatggctatatccaatatgaaacaaaaaaagcg
gccaaagcagctactgaatctgatgcaaatattacaaattatacttataaacctttagca
aaggctttccaagaagttgttgttaatgacgtatccgaagaagcattcccaggcatcaaa
tctctctttgaaaagctcggagagatcaaaaacatcgaaaaagtcgataaatcttattac
atcagatttgctgaccacaaagcagccgattcagccttcttattcttcaacatgtgcatt
gtaggctcatccattgttaaagttgacatgtctccacgtgaaacagattatttccattat
tatcttcttgaagccgcaactcacatgggcgatgaagattcattcgttaaagttgctctc
aagaaccttcctaacaccgttacatgcggccaacacgttcgcgaaatttgcgaaaaatat
ggcgcagtgcaagcacctcgtttgaaccttaatgagaagtgggaaagtcttgggacagcc
acttgcacaatgatgtcacaccaggatgctttaaatgtcatcgaaggccttaaacgagat
aattctcaaataattgcagccagatcgatgtcaattgacgaagccaagctttataaagag
gtatccgatcttaagatatacagagatcaaacgaattcatcaaaagacagacaattctta
gttacagaaccaaaagaattgaaattaatcaaagatgaattcaaatctgcaatgagagtt
gatctttgcggatctctcgctttagttatgttcaagacaacagaactgatggatgctgct
gtatctaactacaatggaaagtttggatcattgcttttcttcgaaaaagttgattcaatg
gctcttcctccattaggaaaatcgtggcctcctcagcagagattcccattcagaaacaac
gtcagagacaggtttatgaggaaagttctggcaatgagacctgatttcaacgaaaacaag
ttcaaggacgtaacacctgaagtcgcaagattccttttaggacatgaaaaggtaatgaac
gcttggcttgatgagtaa
DBGET
integrated database retrieval system
