Trichomonas vaginalis: 4745427
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Entry
4745427 CDS
T01022
Symbol
TVAGG3_0947390
Name
(RefSeq) chromosome transmission fidelity factor 18 family
KO
K10754
replication factor C subunit 1
Organism
tva
Trichomonas vaginalis
Pathway
tva03030
DNA replication
tva03410
Base excision repair
tva03420
Nucleotide excision repair
tva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4745427 (TVAGG3_0947390)
03410 Base excision repair
4745427 (TVAGG3_0947390)
03420 Nucleotide excision repair
4745427 (TVAGG3_0947390)
03430 Mismatch repair
4745427 (TVAGG3_0947390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tva03032
]
4745427 (TVAGG3_0947390)
03400 DNA repair and recombination proteins [BR:
tva03400
]
4745427 (TVAGG3_0947390)
DNA replication proteins [BR:
tva03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
4745427 (TVAGG3_0947390)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
4745427 (TVAGG3_0947390)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
BRCT_2
nSTAND3
AAA_assoc_2
AAA_22
Gp44_lid
DNAX_ATPase_lid
RuvB_N
AAA_33
Motif
Other DBs
NCBI-GeneID:
4745427
NCBI-ProteinID:
XP_001300705
UniProt:
A2G4Z2
LinkDB
All DBs
Position
I:complement(7650696..7653326)
Genome browser
AA seq
876 aa
AA seq
DB search
MPPRKAVEKKELPNFPKAVSNYTLNQGFRFGMSDNPPNLGQVPIPIGKSGCLEGITFVAT
GTMPSITRETLKDIIEKYGGRLTTSISGKTDVVIRGCIEVGPSKLAQARERGLLIIDEES
LFQYLQSTNPNYVPPPPPKISGGPALPESMFPISSILTEKYRPRQLSDIVSNYGALKHLV
DFFEAYDPYEKPKCAILCGPPGIGKSTAATLVALYCDYHPIELNASDTRSKKSLNETFPD
IFDNKAIDAKSGQDQICLIFDEVDGMSAGDRGGLQELTKFVDRAINPVICICNDRENRKL
ETLAKRSVDIKFATPTEQEVASRLRFICEQEGMKVSDESLLRIAQSSNGDFRHAINTLQF
WVPTESDLETDNVNRSAKVIPIVDVVEATTKLFRPKTDFEIRFDCYFVDYGMVPLYMHEN
LPINDNAGYADALESMAIGDVLNNDIYQNMEFQTLPAHGFFSAVAPSILSPGKDWGGMAK
FPMYFGKNSRHKKLERYINEMGRRISRTTNLPTSEINDTTVPLLLMRAKNYLSGRKPNID
GFLDMLDSFEMTLDDYEHLGELYTYGPPAMAAKSLPGTPAVKGAVTRGYRQRHTNASDVV
GKVREVREDYMISERPKPSELRAAAPTKSKKQKRKSSTIKTKRVNKDGEELIDDDEGILD
ESENDEEEDEDIWAAAKNKSNAKSTRRYNSKSTGKDDEGLEFNSASDDAEEDGDWKENKK
SKKDDDDDEEKPKAKRSRKTKTKNNEEKPKSKRGRKPKKDDDEKPKTKKTKSTKPKRGRK
SKEDEDDEPNSEDEAFVASDSSESEAEAQMTSESDEEMEFDDDDESSDSPDEELNLSDDD
DEKEKKAKREAKKNAPPKFKSKLLKKVKGRKTGRKV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgaggaaggcagtggaaaagaaagaacttccaaacttcccaaaggcagtttca
aactatactttaaaccagggttttcgctttggaatgtcagataacccgccaaatttaggt
caagtaccaattcctattggaaaatcaggctgtcttgaaggaattacatttgtagctact
ggaacaatgccatctattacaagagaaacattaaaagacatcatcgaaaaatatggtggt
cggttaactacatcaatttcaggaaaaacagatgtagtcattcgtggatgtatagaagtt
ggccccagcaaacttgctcaggcaagagaaagaggtttactaattattgatgaagaaagt
ttattccaatatcttcaaagcacaaatccaaattatgtaccacctccaccaccaaaaatt
agtggcggaccagcacttccagaatcaatgttcccaatatcatcaatcttaacagaaaaa
tatcgtccaagacaactttctgatattgttagcaattacggcgctctcaagcatcttgtt
gatttcttcgaagcatacgatccatatgaaaaaccaaaatgtgctattctatgtggtcct
ccaggcatcggcaaatccacggctgcaacattagtagcattatactgcgattaccatcca
attgaactcaatgcatcagatactcgctctaaaaaatctctaaatgaaacatttccagac
atttttgacaacaaagcaattgatgcaaagagcggccaagatcaaatatgtcttatcttc
gatgaagttgatggaatgtcagctggagatcgaggaggtctccaagaattaacaaaattc
gttgatagagcgattaatccagtgatttgcatatgcaatgacagagaaaataggaaatta
gaaacacttgcaaagagatctgttgatattaagtttgctactcctacagaacaagaagtt
gcctcaagattaagattcatttgcgagcaagagggcatgaaagtcagcgatgagtcatta
ttaaggattgctcaaagctcaaatggtgatttcagacacgcaattaatacacttcagttc
tgggttccaacagaatcagatttagaaacggataacgtaaataggagtgccaaagttatt
ccaatcgttgatgttgttgaagcaacaacaaaattattccgtccaaagacggatttcgaa
ataagattcgattgttatttcgtagattacggaatggttccactttacatgcacgaaaac
ttgcctataaatgacaatgcaggatatgcagatgctttagagtcaatggctattggtgac
gtattaaataatgatatctaccaaaacatggaattccagactttaccagctcatggattc
ttctctgctgttgctccatcaattctttcaccaggaaaagattggggaggcatggcaaaa
ttcccgatgtatttcggaaagaattcaaggcataagaaattagaaagatacatcaatgag
atgggaagaagaatttctcgcacaaccaatctaccaactagtgaaatcaacgatacaaca
gttccattacttttaatgcgagctaaaaactatctttcaggcagaaaaccaaatattgat
ggtttcctcgatatgcttgatagctttgaaatgactcttgatgactacgagcatcttgga
gagctttatacatacggaccaccagccatggccgcaaaatctcttccaggaacaccagct
gttaaaggtgccgtaacaagaggctacaggcagagacatacgaacgcttccgatgtagta
ggaaaggttagagaagtcagagaagactacatgatcagcgaacgtccgaaaccaagcgaa
ctcagagcagcagctccaacaaagtcaaagaaacagaagcgtaagtcgagcacaatcaaa
actaaacgcgtcaacaaagatggcgaagaactcatcgatgatgatgaaggaattctcgat
gagtcagagaatgatgaagaggaagatgaagatatctgggcagcagcaaagaataagtcg
aatgcaaagtccacgagaagatacaattcgaagtcaacaggaaaagatgatgaaggactt
gaattcaattctgcaagtgatgatgcagaagaagatggagattggaaagaaaataagaaa
tcaaagaaggatgacgatgatgatgaagaaaagcctaaagcaaagagatcaagaaagacg
aaaacaaagaataatgaagaaaaaccaaaatcaaaacgtggaagaaaaccaaagaaagat
gatgatgaaaagcctaaaacaaagaagacaaaaagcactaaaccaaagagaggaagaaaa
tctaaagaagacgaagatgatgaaccaaatagcgaagatgaagcttttgttgcaagtgat
agtagcgaaagtgaagctgaagcgcaaatgacaagtgaaagtgatgaagaaatggaattt
gacgatgatgatgaatcaagtgattctcctgacgaagaactaaatttgagcgatgatgac
gatgagaaggaaaagaaagcaaagagagaagctaaaaagaatgcaccaccaaagttcaaa
tccaaattactcaagaaagttaaaggaaggaagactggccgtaaagtttga
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