Trichomonas vaginalis: 4745454
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Entry
4745454 CDS
T01022
Symbol
TVAGG3_0436460
Name
(RefSeq) cytoplasmic FMR1-interacting protein-related family
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4745454 (TVAGG3_0436460)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4745454 (TVAGG3_0436460)
Factors involved in mRNA localization
Other mRNA localization factors
4745454 (TVAGG3_0436460)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
SIR2
Motif
Other DBs
NCBI-GeneID:
4745454
NCBI-ProteinID:
XP_001300729
UniProt:
A2G4W8
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All DBs
Position
V:31307309..31310998
Genome browser
AA seq
1223 aa
AA seq
DB search
MTNTTIHLPSAKSVEEWQHVSDIHFLETTPRSVPLSSLISYPGQDYIDRIISLKAEIPAA
KHLQVITDLLKDLEVAKSYLVEIYSHRGLLMPISKDESLIQKLSSNSQSAQTALQMLHQL
IAKFQKEKDDLTVITQNLTRMLYSESLWSNGQWSDKLIETFCEIYFVLFTIENLQPSKKS
VLNDISTLMKISKGAQTGNAADMAETTIRIWLGTTNAITQEFINSILANPNYKRISLITD
ILMGYLRNQIENRSFINQDKKFQYITLLKFIIIVYNQAYEKEQKDKKGQKKKMFILKPID
IEYTGMAKAAVESYRFLPLIYEYTVATNVGIHIDYITLPKKGTVKNPIQFPRKRLPELQE
DAHKFFSILTEIINDLNNSPVVSGKQKLDMNINICNKLFQELPGILKIISMSMGIVREMI
IAKQIEAPKIDQNADQNISLYEWAMRRGLTEENSLLILNILWLAKSTKELLLSNYTTIFQ
AISDSIQTTLQNFAINILPQSILRNQEYKDIITNILEVLRTLLGYFPNGMRYEINAKKAS
KVEKHDVSIDIGTPHIYLIELLRVQLQLLVNPDAIAVSRQGVFKGQPLDSEDEKIFKEFL
DQSSYFIELLDLNNTLDKVCDQSFLYYKEYYLDLNKRTFFPVNTSIPVILSKYALKNYRK
LDLTGAIFYPLSIYDDAAATALKYLKSKYLFEEIRAEASICIQYLSREIAQQALNPILKF
QLLQFMPKTVVSQLKESMLSLDMKDEANQEDFLKEDISSLRLGVILQQNTLSILGCPIDT
KTLISDNLNELIHEKLKALVNILESYGLFFIPMFYRIIEILRRTHELLCSFGLILNPFND
ILRLALSTDNPSSLQSLLLNHVYSHIENILVPDCSFFSFPMRVLPKGEMNIKQGIEQIFT
KDIASLFNAYLLKTTRIISIESVKDLFWMIEDGAGQVFSLLFATLLEELEKPFVKIYDNV
RKNLTRIANPPASATFAQAFDVFEGAYHYFIDNQEIRNCLSLMNQIGNVLMLAQLFDNAL
ILKRTTGTLSSSFILSTDPVDNNEKMPETPEVFELFDKTFQSSKPYFSYLGNKIGDNEIL
LPFLSSCVRELVTLLLHDYALFAETSPNLCDVKSQKGFAAIFSVLEFIANNVVIMDSSKG
GGFAKFVEGIYYFAAVVLHMTNQRRLFRALSIGEKLISHFTADLGVNVDDRTNKFVAATK
YFSTSLSSAFATLQPIISSIINK
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatactaccattcaccttccaagcgctaaatcggttgaggaatggcagcacgtc
agcgatatacatttccttgagacaactccgagatctgtacctctcagttccttaatttcg
tacccaggacaggattatatcgatagaattatttctcttaaggcagaaatacctgctgct
aaacaccttcaagtcattacagatttgttgaaggatttggaagttgcaaagagctatctc
gttgaaatttactctcacagaggtttattaatgccaatctcaaaggatgaaagtttgata
caaaaactaagtagcaattcgcaatcagctcagacagccctacaaatgttacaccagctt
attgcaaaattccaaaaagaaaaagacgatttaactgtaattacacaaaatttgacgcgc
atgttgtatagcgaaagcttatggtcaaatggccaatggagtgataaattaattgaaact
ttttgcgaaatttattttgttttatttacaatcgaaaacttacagccttcaaagaaatct
gtactgaacgatatctccacgttgatgaaaatctccaaaggagcgcagacaggaaacgct
gcagatatggcagaaacaacaattcgtatttggctgggaacgacaaacgctattactcaa
gaattcatcaattcgatcttagctaatcctaactacaaaagaattagtctcattactgat
attttaatgggatatcttcgaaatcaaattgaaaatcgttctttcatcaatcaagacaag
aaattccaatacatcactctactcaaattcatcataatcgtctataaccaggcctacgag
aaggaacagaaagacaaaaaaggtcaaaagaagaaaatgttcattctcaagccaattgac
atcgaatacaccggtatggctaaagcagccgtagaatcctatcgtttcttaccacttatt
tacgaatataccgttgctacaaacgttggaattcacattgactacattacccttccaaag
aaagggacagtgaagaatccaatacaattcccaaggaagaggcttccagaattgcaagaa
gatgcccataaattcttctcaattcttacagaaatcattaatgatcttaataacagccct
gtagtgtccggaaagcagaaacttgacatgaatattaatatttgcaacaagttgttccaa
gaattaccaggaattttgaagattatttcaatgtcaatgggaattgtcagagaaatgatc
attgccaagcagattgaagccccaaagatcgatcagaatgcagatcagaacatttccctc
tacgaatgggccatgcgccgtggtttaacagaagaaaattcacttcttatactaaatatc
ctttggttggccaaatccaccaaggaacttttattatcaaattatacaacgatcttccag
gccatttccgattcaattcagaccactttacagaattttgcaattaatatccttcctcaa
tcaattttgaggaaccaggagtacaaggatatcatcacaaacatccttgaagtgctcaga
acattgctaggatactttccgaacggaatgagatacgaaattaacgcaaagaaggcttcc
aaggtcgaaaaacacgatgtttcgatagatataggtacaccacatatatatcttatcgaa
cttcttcgcgttcagcttcaattactggtaaatccagatgcgatcgctgtttcaaggcaa
ggagtattcaaaggacaaccactcgatagcgaggatgagaaaatattcaaagaattcctc
gaccaatcatcatatttcatagaattacttgatttgaacaatacattggacaaagtatgc
gaccaatcattcctttactacaaggaatactatcttgatctcaacaaacgcactttcttc
cctgtaaatacctcaattcccgtaattctttcaaaatatgctctgaaaaactacagaaaa
ctcgatttgacaggtgctatcttctatccattgtccatttacgatgatgcagcagccaca
gcccttaaatacctcaaatctaagtatcttttcgaagaaattcgcgcggaagcatcaatt
tgcatccaatacttatccagagagattgcacaacaagctctgaacccaattctcaagttc
cagctcttacaattcatgccaaaaacagttgtttctcaattaaaagaatcaatgttaagt
ttagatatgaaagatgaggccaatcaagaagatttcctcaaggaagatatttcttcactc
agacttggcgtaattttgcagcaaaacacgttaagtatcctcggatgtccaattgacact
aaaacattgatttctgataacttgaatgagctcattcacgagaaactcaaggcattggtc
aatatacttgagtcgtacggcttgttctttatcccaatgttttatcgtatcatagaaatc
ctccgtaggacgcatgaattgctttgctcgtttggattaatacttaacccgttcaatgat
atccttagacttgctctttctactgataatccctcatcattgcagtcattgcttcttaat
cacgtttattctcacattgagaacatacttgtaccagattgctcatttttctccttccca
atgcgtgttcttcctaagggagaaatgaatataaagcaaggaatcgaacaaattttcaca
aaagacattgcttcgcttttcaacgcatatctccttaagacaacacgcatcatatcaatc
gaatccgtaaaagacctcttctggatgatagaagacggcgcaggccaagttttctcttta
cttttcgcaactttgttggaagagttagaaaaaccgtttgttaaaatttatgacaatgtt
cgtaaaaatttgacaagaattgccaatccgccggcatcagcaacattcgcacaggcattt
gatgtctttgaaggtgcctatcactattttattgataatcaagagatccgaaattgtttg
tctcttatgaaccaaatcggaaacgtcctgatgcttgcccagctcttcgataacgcattg
atattgaagagaacaacaggaactttgtcatcatctttcattttgtcaacagatccagtt
gacaacaatgaaaagatgccggaaacaccggaagtctttgagttattcgataagacattc
caatcttcaaagccatacttctcttacttaggaaataagatcggagataatgaaattctt
cttccgttcttgtcttcatgcgtaagagagttggtgactcttttgctgcatgattacgct
ctatttgctgaaacttctcctaatttatgtgatgtcaagtcacaaaaaggtttcgcagcg
attttctctgtcttagagttcatcgctaataacgtagtaatcatggattcaagcaaaggg
ggtggtttcgcaaaatttgttgaaggaatttattatttcgcagctgttgttttacatatg
accaaccagagaaggcttttcagagcactttcaataggagaaaagcttatttcacacttt
acggcagatttgggcgtaaatgttgacgatagaacgaataagttcgtggctgctacgaaa
tatttcagtacttcactttcatcagcgttcgctacacttcaaccaattatttctagtatt
attaacaaataa
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integrated database retrieval system
