Trichomonas vaginalis: 4745586
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Entry
4745586 CDS
T01022
Symbol
TVAGG3_0454140
Name
(RefSeq) vacuolar protein sorting VPSs16 family
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tva
Trichomonas vaginalis
Pathway
tva04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
4745586 (TVAGG3_0454140)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tva04131
]
4745586 (TVAGG3_0454140)
Membrane trafficking [BR:
tva04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
4745586 (TVAGG3_0454140)
Hops complex
4745586 (TVAGG3_0454140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Motif
Other DBs
NCBI-GeneID:
4745586
NCBI-ProteinID:
XP_001300862
UniProt:
A2G4I2
LinkDB
All DBs
Position
V:34137741..34140483
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AA seq
770 aa
AA seq
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MKNSDDFISKIQNDLNCQHYISECDTGFISNDKSLLTPCYFGGPILKRLNDASKVFQFYS
NAGLQIGSPFTYRNAFDIHTIYIFPDCTVGFLHKDSTLVIVKASGMIETVFSPIADVVSS
QSSYLGLTFLTKNGLIIFVNAFKKSVDITISVDPTITPVNVALHSLTNETFIIVSDDHNI
YLKSRTNLQYLAGLDSLPQKLYVPIDGKIGIAVISTVGVVFPIDSSIQDHIPFVSLEECE
IAGWCDDIFVSFSNSEISIFSNFNYIQTVRFDDLRYAFSDYKTIRVLTSQGLYVIVPEIK
EITDFKSSPERDTINLLINSYKLYENKSIECLFNTENLDYSDVVEKMVRIAPYILDFDIQ
RTIMNTSSFVRSSTNSFSLNFSNFAEIIKNIKFINTMFLERKISFTTTPYMVSFLENNLF
TDFYTFSVERLCNLLLYNEAARLSDFYGMSEAIVSEKWAVDYLSLKGQDSINFVINRLKS
IPNVNYREIADNCLKRNFPSSAVTFANQLTCVKDRVQFLLPLSLKESIDSSINNLDGSSI
VSVWKKTGQELSQMRDTILYCKWMNTKLPLEFNEFATYIYVFFEQNMKRTKSYGNDTKVL
EAGLAAIPENDVYYKQACHSQIALNIMLDKKKSDKSSLSFTKSPRQYMKEAVINNDEEMF
KKIKDKYHFSDQMSSVIRLQALASNEMWSQFDNATRSEPPCGWMTVCDIVFAAGNFEKAK
NFVRMAPTSQQKLAMCDKLKMWTEARIMCEELKLNELTEKYRNLELASHL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattcagatgatttcatctcgaaaattcaaaatgatctgaattgccaacattat
atatccgaatgcgatactggttttatatcgaatgataaatcgttgctgactccttgctat
ttcggaggaccgattttaaaaagattaaatgatgccagtaaagtatttcaattctattca
aatgcaggtttacagattggatcacccttcacatatcgaaatgcatttgatatccacacc
atttatatttttccagattgcactgttggctttctacataaagattcaacactcgttata
gtaaaagcatcaggtatgattgaaactgtattttctcccattgctgatgtggtttcttct
cagtcttcttatttaggattaacttttttgacgaaaaatggcttaattatattcgtaaat
gccttcaaaaagtcagtagatattacaatctccgtagatccgacaattactcccgttaat
gttgcattacactccttaacaaacgaaacatttataattgtcagcgatgaccataatatt
tacttgaaatcaagaacaaaccttcaatacctagccggattagatagtctaccgcaaaaa
ttatatgtccctattgatggaaaaatcggaattgcagttatttcaactgttggagtcgtt
tttcccattgattcctcaatacaagaccacatcccattcgtatcattggaagaatgcgaa
attgctggctggtgtgatgatattttcgtttctttttcaaattcagaaatttcaattttt
tcgaattttaattacatacagacagttcgctttgacgatctgagatatgctttttcagac
tataaaacaataagagttttaacttcgcaaggtttatacgtaattgttccagaaataaaa
gaaattacagatttcaaatcgagtccagagcgtgatactataaacttgctcataaattca
tacaaattatacgaaaataaatcaatagaatgcttatttaatacagaaaatctcgattat
tcggatgtcgttgaaaaaatggtcagaattgcaccttacatactcgatttcgatatacaa
cgtacgataatgaatacttcttcgtttgtaagatcttctacgaactcatttagtttgaat
ttttcaaattttgctgaaattatcaaaaatattaaatttattaacaccatgttcctagag
agaaagatttcgtttactacaaccccttacatggtttcttttttggaaaataatttattt
acagatttttacactttttcagtcgaacgactctgcaacttgctcttatataacgaggct
gctcgtttaagtgacttttacggcatgagcgaggcaattgtttccgaaaaatgggctgtt
gactatttatcactaaaaggccaagattctatcaattttgtcatcaacagactcaaaagt
atcccgaatgtcaactaccgagaaatcgccgataattgtctaaagaggaacttcccctct
tcagctgtcacttttgcgaatcaacttacctgtgtaaaagaccgcgtccaatttcttttg
ccgctgagtttgaaggagagtatagactcctcaattaataatctcgatggttcttcaata
gtttcggtttggaagaagacaggacaagaattatcacaaatgagagatacaatattgtat
tgcaagtggatgaacactaaattaccacttgaatttaatgaatttgcaacttacatatat
gttttctttgaacaaaacatgaaaagaactaaatcatacggaaatgacacaaaagttcta
gaagctggacttgctgctattccagagaatgatgtatactacaagcaagcatgccatagc
cagattgctcttaatataatgcttgataaaaagaaatctgacaaatcttcgctttctttc
actaaatctccaaggcagtacatgaaagaagctgttataaacaacgatgaagagatgttt
aagaagatcaaagacaaataccacttctcagaccagatgtcatcagtaatcagactccag
gcactggcttccaacgaaatgtggtcgcagtttgataatgcgactcgttctgagcctcca
tgtggctggatgactgtttgcgacattgttttcgctgcaggaaactttgaaaaagcgaaa
aactttgtcagaatggccccaacatcccaacagaaactcgcaatgtgcgataaactgaag
atgtggactgaagcaaggattatgtgtgaggaattgaaacttaacgaattaacggagaaa
tatagaaatttagaactcgcttctcacttgtaa
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