Trichomonas vaginalis: 4746221
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Entry
4746221 CDS
T01022
Symbol
TVAGG3_1077760
Name
(RefSeq) replication factor C / DNA polymerase III gamma-tau subunit family
KO
K10755
replication factor C subunit 2/4
Organism
tva
Trichomonas vaginalis
Pathway
tva03030
DNA replication
tva03410
Base excision repair
tva03420
Nucleotide excision repair
tva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4746221 (TVAGG3_1077760)
03410 Base excision repair
4746221 (TVAGG3_1077760)
03420 Nucleotide excision repair
4746221 (TVAGG3_1077760)
03430 Mismatch repair
4746221 (TVAGG3_1077760)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tva03032
]
4746221 (TVAGG3_1077760)
03036 Chromosome and associated proteins [BR:
tva03036
]
4746221 (TVAGG3_1077760)
03400 DNA repair and recombination proteins [BR:
tva03400
]
4746221 (TVAGG3_1077760)
DNA replication proteins [BR:
tva03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
4746221 (TVAGG3_1077760)
DNA Replication Termination Factors
ELG1-RFC complex
4746221 (TVAGG3_1077760)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
4746221 (TVAGG3_1077760)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
4746221 (TVAGG3_1077760)
Check point factors
HRAD17(Rad24)-RFC complex
4746221 (TVAGG3_1077760)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_14
Rad17
AAA_22
RCF1-5-like_lid
AAA_lid_RFC1
Mg_chelatase
AAA_16
nSTAND3
AAA_11
ABC_tran
Viral_helicase1
AAA_25
DNAX_ATPase_lid
AAA_19
RNA_helicase
ATPase_2
ORC-CDC6-like
AAA_5
AAA_assoc_2
AAA_30
RuvB_N
NPHP3_N
NTPase_1
AAA_2
MeaB
AAA_24
AAA_18
VirC1
IstB_IS21
AAA_RNF213_4
AAA_28
cobW
DAP3
T2SSE
Sigma54_activ_2
MCM
AAA_33
DUF7692
DO-GTPase1
AAA_7
Gp44_lid
AAA_3
DUF815
CbiA
Motif
Other DBs
NCBI-GeneID:
4746221
NCBI-ProteinID:
XP_001301493
UniProt:
A2G2Q5
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MSQSQPWVEKYRPRVLDDVVGNTAVIERLRALAAEGNIPNLILTGPPGCGKTTSLLALCH
QLLGDKEKDAVIELNASDDRGIDVVRKNIKEFAKRHVALPEGRHKVVLLDESDSMTDAAQ
QAMRRIMENYTKTTRFVFACNQSEKVIEPIQSRCAIVRFSRVEENEIAARLMKICELEGF
KPESEGIATLARLADGDMRTAINGLQSTYVRYGLVTQENVLATVDIPNPTAIADIFTALS
TDNFRNALIILNGLEKRGHSPSDIVKSLFSFVRRTDTIQEKLKLNLLKEIGLAQMRVSQG
MSSNLQLDGLLATLFKVYHQAPQQ
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagagccagccatgggttgagaaatatcgtccacgcgtcctcgatgatgttgta
ggaaacacagccgtcatcgaacgtcttcgtgctttggccgctgaaggcaatattccaaat
cttattcttaccggccctcctggctgtggtaagacaacatcattacttgcactttgccac
cagcttcttggtgataaagaaaaagatgctgttatcgagttaaacgcttctgatgataga
ggaattgacgttgttcgtaagaacatcaaagaattcgcaaagagacatgttgctcttcca
gaaggacgccacaaagttgtacttttggatgaatcagactcaatgactgatgcagcacaa
caagctatgcgtcgtatcatggaaaactacacaaaaactacaagattcgtcttcgcttgc
aaccagagtgagaaagttatcgaaccaatacaatctcgttgtgcaattgtcagattttca
agagttgaagaaaacgaaattgcagcacgtctcatgaagatctgcgagttagaaggattc
aaaccagagtcagaaggcattgctacacttgctagattggctgatggagatatgagaact
gctatcaacggtcttcagtcaacatacgttagatatggacttgttacacaagaaaacgtt
cttgctacagttgatatacctaatccaacagctatagcagacatattcacagctttatca
acagataacttccgtaacgctcttattatactaaatggacttgaaaagcgtggacattca
ccatcagatatagtgaaatccctcttttcgttcgtccgccgtacagatacgatccaagag
aagctaaaactcaatttacttaaggaaattggtctcgcccagatgcgtgtttcacaggga
atgtcctctaacctccaacttgatggacttcttgctactttgtttaaagtctatcatcag
gccccacaacagtaa
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integrated database retrieval system
