Trichomonas vaginalis: 4747058
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Entry
4747058 CDS
T01022
Symbol
TVAGG3_1008680
Name
(RefSeq) exosomal core protein CSL4 family
KO
K07573
exosome complex component CSL4
Organism
tva
Trichomonas vaginalis
Pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4747058 (TVAGG3_1008680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4747058 (TVAGG3_1008680)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
4747058 (TVAGG3_1008680)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
4747058 (TVAGG3_1008680)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
TRAM
HAD
Motif
Other DBs
NCBI-GeneID:
4747058
NCBI-ProteinID:
XP_001302318
UniProt:
A2G0D9
LinkDB
All DBs
Position
I:<18590361..>18590873
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AA seq
139 aa
AA seq
DB search
MTILLPGDTLPLNSKRDDCSKFTTLWGKMDNDEFIPIRGAIIPKIDDIVIARVIRAKRKE
LHLVLLSCNDEPLQSPLLAELRSVDIQEHDVDNVIASDFAKPGDLVKAQVVALGRSGFLA
QLSTAKDGLGVVKIEEVQE
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgactattttgttaccgggtgatacccttcctttaaactcaaagcgtgatgattgctcc
aaatttaccactctttggggaaaaatggataacgacgaatttattcccattcgcggagca
attattccaaagattgacgatattgttattgctcgtgttatcagagctaaaagaaaagaa
ttacacttagttttactctcatgtaacgacgagcctttacaatctccattattggctgag
ctaagatcagttgatattcaagagcatgatgtagataacgttatcgcatctgattttgct
aagcctggagatttggttaaagcccaagttgttgctcttggtagatcaggcttcttagct
caactttctacagcaaaagatggactcggagttgttaaaattgaggaagttcaggaataa
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