Trichomonas vaginalis: 4747740
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Entry
4747740 CDS
T01022
Symbol
TVAGG3_0477640
Name
(RefSeq) RNA binding
KO
K13126
polyadenylate-binding protein
Organism
tva
Trichomonas vaginalis
Pathway
tva03015
mRNA surveillance pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4747740 (TVAGG3_0477640)
09123 Folding, sorting and degradation
03018 RNA degradation
4747740 (TVAGG3_0477640)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4747740 (TVAGG3_0477640)
03041 Spliceosome [BR:
tva03041
]
4747740 (TVAGG3_0477640)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4747740 (TVAGG3_0477640)
mRNA cycle factors
Stress granule specific factors
4747740 (TVAGG3_0477640)
Spliceosome [BR:
tva03041
]
Complex C
Other components
Complex C specific factors
4747740 (TVAGG3_0477640)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_10
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
4747740
NCBI-ProteinID:
XP_001302991
UniProt:
A2FYE4
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All DBs
Position
II:<3314401..>3315988
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AA seq
477 aa
AA seq
DB search
MDPNWKEVFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELA
KRAISEVNYTKLDGVPIRILWSDPGTKRAIKNNVGALFIRGLDENIEVSQLHDAFSNFGE
IVSCKIPLTNGKSRGYGFITFYKEDDAKRAKTDLADASINGKPIQIEFYQKPTRKNPEET
FTNVFIKPLPADIFKTDDDLANFFKEFGDFVVTGKANPAIKRKEDGSSCEFGFCNFKHHE
DAVKAVDALNGKQHESGKVTFSCCRAQTKAERQAFLAKQSAEFRRRLNEETRGRNLYVKN
FDQSVTDEQFKEYFEQFGEVEKCSIRREAQEPHESKGFGFVLFKTKESAQNALENAVITP
LNGKTPYIGLFKMKEEREREKASNQRKQQPKGAMIPNTIGGPVIPTQQIMMQSMMMPQVP
VSAPATSKDLLKNELTERNISGSKLKAILSSISEEQAKSLCSDQEKLNHWVEEKTKM
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaactggaaagaagtattcgttggtgatctccccggctcagttgatgagaat
ttcatcaaagagattttcaaggattacggcagcttcccatcaggcacagtcacagtcaag
aagcataaatctcttgacaagtcctttgcttttgtcacattcgaatcccacgaattagcc
aagcgtgctatttccgaagtcaactacaccaagctcgatggtgttccaatccgtattctt
tggtccgatccaggcacaaagagagccatcaagaacaacgttggtgctcttttcatccgt
ggtcttgatgagaacattgaagtttcacagcttcacgatgccttctccaacttcggtgaa
atcgtttcctgcaagatcccgttaacaaacggcaagtctcgtggctacggcttcatcaca
ttctacaaggaagacgatgccaagcgtgctaagaccgatcttgctgatgcttccatcaac
ggcaagccaattcagatcgagttctaccagaagccaaccaggaagaacccagaagagaca
ttcacaaacgtcttcatcaagccacttccagccgacatcttcaagacagacgatgacctt
gctaatttttttaaggagttcggtgactttgttgtcaccggcaaggccaacccagccatt
aagcgcaaggaagatggcagcagctgtgaatttggtttctgcaacttcaagcaccacgaa
gacgccgtcaaggccgtcgacgccctcaacggcaagcagcacgaatccggcaaagtcaca
ttttcctgctgccgtgcccagactaaagccgagcgccaagccttcttagccaagcagtcc
gccgagttccgccgccgccttaacgaagagacacgtggtcgtaacctttacgtcaagaac
ttcgaccagagtgtcaccgacgaacaattcaaagaatacttcgagcagttcggtgaagtc
gagaagtgcagcatcagacgcgaagctcaggagccacacgaatctaagggcttcggcttt
gttcttttcaagacaaaggaaagtgctcagaatgctctcgagaacgccgtcatcacccca
ctcaatggcaagaccccatacattggtctcttcaagatgaaagaagagcgcgagcgtgag
aaagccagcaaccagaggaagcagcagcctaagggcgccatgattccaaacaccattggt
ggacctgtcattccaacacagcagatcatgatgcaatccatgatgatgccacaagttcca
gtctcagctccagccacatccaaggaccttctcaagaacgaacttaccgagcgcaacatc
agcggcagcaagcttaaggctatcctttcctccatctccgaagaacaagccaagtcactt
tgcagcgatcaagaaaagttgaaccactgggttgaagagaagaccaagatgtaa
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