Trichomonas vaginalis: 4749807
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Entry
4749807 CDS
T01022
Symbol
TVAGG3_0696140
Name
(RefSeq) Ser-tRNA ligase family
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tva
Trichomonas vaginalis
Pathway
tva00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
4749807 (TVAGG3_0696140)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tva01007
]
4749807 (TVAGG3_0696140)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tva03016
]
4749807 (TVAGG3_0696140)
Enzymes [BR:
tva01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
4749807 (TVAGG3_0696140)
Amino acid related enzymes [BR:
tva01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
4749807 (TVAGG3_0696140)
Transfer RNA biogenesis [BR:
tva03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
4749807 (TVAGG3_0696140)
Prokaryotic type
4749807 (TVAGG3_0696140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
PI3K_P85_iSH2
Uds1
APG6_N
Leu_zip
DUF4407
Laminin_II
SKA2
Motif
Other DBs
NCBI-GeneID:
4749807
NCBI-ProteinID:
XP_001305028
UniProt:
A2FSM1
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All DBs
Position
III:complement(13554148..13555814)
Genome browser
AA seq
501 aa
AA seq
DB search
MSAAKKSSAAQVFTAGVDIKNFRGKTDEELQVWRENQRKRNRPPELIDQIVKDDEEYRAA
LKAVADTMKEKNQAQASLKPKGGVKLAPEEIEAIKEKCRQLTAKISELEAKRDELFAKVE
KELSTVGVMIEPEVPDSLDEANNKVIMMCGKIPEIPNFRPHNELLAMIDGYEPERGARVA
GHRGYYLKGMALKLNQALFRYGLDFLQAHGYTAIHTPFFMKSEVMARVCQLEDFQETLYH
IDSPTNDPKDDMFLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGASGKDNWG
IFRVHQFEKVEQFCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELNYSTA
RKVDIEAWFPSYNQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATLCATE
RTLCCILENYQTPTGIRIPKVLQPYMRELMLSENHSNEDYNKPDLDLQAEHCSVPEFKDI
DFIPFVQDAKAVAGVDGNTSV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcaaagaagtcatctgctgctcaggtattcactgctggtgttgatatcaag
aacttccgtggtaagaccgatgaagaactccaagtttggcgtgaaaaccaaagaaagaga
aatcgtccaccagagttaattgaccaaatcgtcaaggacgatgaagaataccgtgctgct
cttaaggctgttgctgacacaatgaaggagaagaaccaagctcaagcttctctcaagcca
aagggtggtgtcaaattagctccagaagaaatcgaagccatcaaggagaaatgccgtcaa
cttacagctaagatctcagagctcgaagcaaagcgtgatgaattattcgctaaggtcgag
aaggaattatccacagttggtgttatgatcgagccagaagtcccagattcactcgatgaa
gctaacaacaaggtcatcatgatgtgcggcaagatcccagagattccaaacttcagacca
cacaacgaattacttgctatgatcgatggttacgaaccagaacgtggtgcccgtgtcgct
ggccaccgtggctactatcttaagggcatggctctcaagttgaaccaggctctcttcaga
tacggtcttgatttcctccaagcccacggttacacagccatccatacaccattcttcatg
aagagtgaagttatggcccgtgtttgccaactcgaagacttccaggagacattataccac
atcgactctccaacaaacgatccaaaggatgatatgttccttatcgctacatcagagcaa
acactctgcggctaccatctcaacgagtcccttgatgactcacaattaccaaagaagtac
tgcggcttctcatcctgcttccgtaaagaggctggtgcttcaggcaaggataactggggc
atcttccgtgtccaccaattcgaaaaggttgaacagttctgcattacatcaccacataat
ggtgaatctcagaagatgcacgaacaaatggtccacaactcctgcgaattcatcaaatcc
ctcggccttccattccgcgctgtcttagtcgtctctggcgaactcaactactcaacagct
cgtaaagtcgatatcgaagcatggttcccatcatacaaccagtaccgtgaactcgtttcc
gcttcaaactgcaaggacttccagtcacgtaaactcgatatcagatacggccacggaaag
aacaaagacggtgagaaggaatacgtccacatgctcaacgctacactttgcgctacagag
agaacactctgctgcatcctcgagaactaccagacaccaacaggtatcagaattccaaag
gttcttcagccatacatgagagaactcatgctcagtgagaaccactcaaacgaggactac
aacaagccagatcttgatctccaggcagaacactgctcagttccagaattcaaggatatc
gacttcatcccattcgttcaggatgccaaggctgtcgctggcgttgatggcaacacaagt
gtttaa
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