Trichomonas vaginalis: 4753194
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Entry
4753194 CDS
T01022
Symbol
TVAGG3_0076260
Name
(RefSeq) transcription initiation factor TFIID family
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tva
Trichomonas vaginalis
Pathway
tva03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4753194 (TVAGG3_0076260)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
4753194 (TVAGG3_0076260)
03036 Chromosome and associated proteins [BR:
tva03036
]
4753194 (TVAGG3_0076260)
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
4753194 (TVAGG3_0076260)
Coactivators
SAGA/TFTC/STAGA complex
4753194 (TVAGG3_0076260)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
4753194 (TVAGG3_0076260)
STAGA complex
4753194 (TVAGG3_0076260)
TFTC complex
4753194 (TVAGG3_0076260)
SAGA complex
4753194 (TVAGG3_0076260)
SLIK complex
4753194 (TVAGG3_0076260)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
4753194
NCBI-ProteinID:
XP_001308370
UniProt:
A2FI12
LinkDB
All DBs
Position
IV:complement(12140544..12141888)
Genome browser
AA seq
438 aa
AA seq
DB search
MTKAKQETLRLIFKSLGLNVDNEASLMYPLVEHAQTSILKVLGNALQIAHRCKRTKLTVA
DINVALESLRLEPLFGYSSQQEPNVVDVNGDNKLLVYDDSFAQLEQYARRELPAYPLATH
FDVVWIALNGIGHENLETMELSNEKLENTLNKQHNQQRQKTQDSDYFVVSNIHQFSYVNQ
KFFGASGSFLMSSKIVDRELMFSKLSVLDCIQTLVPYYIRFSLVQFKDHPNDWDTLYSSL
CTVRALVQNPKLEYINCYIQSFITIALSFLLNPEILRTNAIALVRMRELAAEFLLVICDK
LSNTYPMVQPHITAQLISVLIEHDYSVSEKFGAFCGLNAFGPQTIAKFVLPHIEMIIKDL
VSGPMKDGDRNVRMIAASFYDTLVNAVGLCLYSDTSKSYIKGTLELAPKTGEQREKIFEA
LGSLLLPFYIDDSVELSI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagctaagcaagagactcttagacttatctttaaatctcttggcttgaacgtt
gataacgaggcatctctcatgtatccactcgttgaacatgcacagacaagtatacttaaa
gttcttggaaatgcgcttcaaattgctcatagatgtaaaagaacaaagctaacagtcgct
gatatcaatgtagctctagaatctctccgtcttgaaccattatttggctattctagccag
caagaacctaatgtagtagatgtaaatggagataataaactacttgtatatgatgactcc
tttgctcagctagaacaatacgctcgcagagaactcccagcatatcctcttgctacccat
ttcgatgtagtgtggattgctctgaatggaattggtcatgagaatttagaaaccatggaa
cttagtaatgagaaattggaaaataccctgaataagcagcataatcaacaacgacagaag
acacaagattctgactatttcgtcgtttcaaacatacatcaattttcatatgtaaatcaa
aaattctttggagcatcaggatcatttcttatgtcgagtaaaattgttgatagggaactg
atgttctcaaaattatctgtattagactgtattcagactttagtcccttattatatcaga
ttttctctcgtacaattcaaagatcaccccaatgattgggacacattatattcgtcgctt
tgcactgttagagctctagtacaaaatccaaaactcgaatacatcaattgttacatacag
agctttattacaattgctctctcatttttacttaacccagagattctacggactaacgca
atagctttggttcgtatgagagagctagcggcagagtttttacttgttatatgcgataaa
ttatcgaatacatatccaatggtccaaccacatattacagcgcaacttatcagcgtactt
atcgaacatgattactcagtttcagagaaatttggagctttttgcggattaaatgcattt
ggtccacaaacaatagccaaattcgtcctcccacatatagaaatgatcattaaagacctt
gtatcgggtcctatgaaggatggtgatagaaatgtcagaatgatcgcagcatctttttac
gatactcttgtaaacgctgttggtttgtgtctctacagcgatacgtctaagagttacata
aaaggaactctggaattggctccaaagaccggagagcagagagaaaagatttttgaggcg
ctgggatcattattacttccgttttatattgacgacagtgtggaactgtcaatttaa
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