Trichomonas vaginalis: 4753492
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Entry
4753492 CDS
T01022
Symbol
TVAGG3_0181420
Name
(RefSeq) transcription initiation from RNA polymerase II promoter
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tva
Trichomonas vaginalis
Pathway
tva03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4753492 (TVAGG3_0181420)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
4753492 (TVAGG3_0181420)
03036 Chromosome and associated proteins [BR:
tva03036
]
4753492 (TVAGG3_0181420)
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
4753492 (TVAGG3_0181420)
Coactivators
SAGA/TFTC/STAGA complex
4753492 (TVAGG3_0181420)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
4753492 (TVAGG3_0181420)
STAGA complex
4753492 (TVAGG3_0181420)
TFTC complex
4753492 (TVAGG3_0181420)
SAGA complex
4753492 (TVAGG3_0181420)
SLIK complex
4753492 (TVAGG3_0181420)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WDR54
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
TFIID_NTD2
WD_LRWD1
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
4753492
NCBI-ProteinID:
XP_001308660
UniProt:
A2FH92
LinkDB
All DBs
Position
IV:27933442..27934970
Genome browser
AA seq
471 aa
AA seq
DB search
MNDNLAIDAVNSFSSTFNYSTTVPHGETIEEMLQSTQYLESSPITFTYSFGGRRELIPGE
VYQTYLDFMNKNKGLTALRSVLYPLFCQLVIYFRRYEETDKCKEFVEKYLSTIPQEYLQE
VTQFVENEEFYERYASIFNMQHFILYCDEKTANVLVDFINEQYNSQLRALLTDSITIRIK
RDVQKFSEIRFISPDKHSELSIISGTIPGCNLAVIPKSAPYIYAVLDGNNVVCLETEKHI
SKILYRHAAPITTICASSTGSLCVTADVSGVCRVWSKNGSRLLSDVMCPIWSSCFAPIGG
VFALGYQDGTVRLFRSDNCSVFRAFVGHTKSIIAICFHPNCSYVASASLDSTIRLWDVRT
AETKRLFIASQPPSAVAISPDGKNLAYFDGSLHLCDIGTGENKALVVLPLKFIAGIHFLA
SGTNAVVVAKGGAVFAVNFETQNATELTAVEKTVVFSGIPQENELRILTAE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataatttagcgattgatgcggtcaattcattttcatctacatttaattatagt
acaacagttcctcatggcgaaactatcgaagaaatgttgcaatcaacacaatatctcgaa
tcaagtcctataacgtttacttattcttttggaggtagaagagagttaatccctggtgaa
gtctatcagacttatcttgactttatgaataaaaacaaaggattaactgctcttcgctcc
gttctttatccgcttttttgccagctagttatctatttcaggcgttacgaggagacagat
aaatgcaaagagttcgtcgaaaaatatctttcaacaattcctcaagaatatttacaagaa
gttacacaatttgtagaaaacgaagaattttacgaacgatatgcaagtatttttaacatg
cagcatttcatcttatactgtgacgagaaaacagccaatgttttagttgattttattaat
gaacaatataattctcaacttagagcattattaaccgattcaattaccatcagaattaag
agagatgtacagaaattctcagaaattaggtttatttcaccagacaaacacagtgaattg
tcaattatctctggaacaattcctggctgcaatcttgctgttattcctaagagtgctcca
tatatttatgctgttcttgatggaaataatgtcgtttgcctagaaactgaaaagcatatt
tcaaaaatactctacagacatgcagctcctattactacaatatgcgcttcatcaacagga
agcttatgtgttactgctgatgtaagcggagtttgcagagtttggtctaaaaatggatca
agattactttcagacgttatgtgtccaatttggtcctcctgctttgcaccgattggagga
gtgtttgctttgggttaccaggatggtactgttcgtcttttccgttcagataattgctca
gtattcagagctttcgttggccatacgaaatctatcattgcaatctgtttccatccaaac
tgcagctatgttgcatcagcgtctctcgattctaccatcagattatgggatgtaagaaca
gcggagacaaaaagattgtttattgcctcacagccaccatccgctgttgctatatcacct
gatggaaagaatctcgcttatttcgatggttctctccatttatgcgatatcggaactgga
gaaaacaaggctttagttgttctacccctcaaatttattgctggtatccacttccttgca
agcggtacaaacgctgttgtagttgctaaaggtggagctgtttttgctgttaatttcgaa
actcagaacgcaactgagctgacagctgttgaaaagacagttgttttctcaggaatccca
caagaaaacgagttaagaatactcacagctgaataa
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