Trichomonas vaginalis: 4753550
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Entry
4753550 CDS
T01022
Symbol
TVAGG3_0427820
Name
(RefSeq) ubiquitin protein ligase binding
KO
K10609
cullin 4
Organism
tva
Trichomonas vaginalis
Pathway
tva03420
Nucleotide excision repair
tva04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4753550 (TVAGG3_0427820)
09124 Replication and repair
03420 Nucleotide excision repair
4753550 (TVAGG3_0427820)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tva04121
]
4753550 (TVAGG3_0427820)
03400 DNA repair and recombination proteins [BR:
tva03400
]
4753550 (TVAGG3_0427820)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tva04147
]
4753550 (TVAGG3_0427820)
Ubiquitin system [BR:
tva04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
4753550 (TVAGG3_0427820)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
4753550 (TVAGG3_0427820)
TCR (transcription coupled repair) factors
Cul4-CSA complex
4753550 (TVAGG3_0427820)
Exosome [BR:
tva04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4753550 (TVAGG3_0427820)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
wHTH-PRTase_assc
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
4753550
NCBI-ProteinID:
XP_001308718
UniProt:
A2FH20
LinkDB
All DBs
Position
V:complement(29939028..29941133)
Genome browser
AA seq
701 aa
AA seq
DB search
MRTKQLRAPLHDEFEIPNIAHITRGFAVKSMRPPNLIKAPFEIPEITKFANYQDQFQDAI
THCLTLDQVGFQVQKIARISQSLSLSKDCAEAHEFISKQIIEFAKSIPTEISNCRTYEEI
GQFWEKIQSKLSITTLSFSYLCVKSLGLRTYRDIFLEALRNEYTQNHELFETVANIIIEA
YNESRNDCSSEKLKIHFIFLNDTGLFDTLFIEMLINSVLSIITPVIKESLNNGISSYLHQ
AQELSIREEKLASPLLTQTQLRKLTSSVNTAIFTSNLNNFVAGGLHELVTNNDKESISIC
AHFSTATNTTSTFTQDLARVFEEEVSKCFEKEDPIPDIINLYKALSSFNAAAFGTSSARV
LTSGFERGFKVDDENTARKLELSIHKCFPLQVCDISPYYGLFKMLRCKDTFQSYHSLYLN
RRSLECKPEQLENDKKFADNLRESCGTRYTEPIDQTFADINLSSSLKKKFFGKIPNSPVK
SIFSPLILKREQWPTIEPITGIVPADIKQCMDDFETYFKVECRGKSIQWTMQLTKVSLEC
KGFSNLTELTCSGVVALVLLSIASGNDSVEKIIENTKLTEKDIQNAIAKMSQRKNGKVLL
KPLALNPEASVEGGKLDVFYYVPATTSSSAKIPVNYDKQIEAAIMKILKEKQTLEKEELK
GEVSKYLPFKFEDKDFDLRIKALDAQAYIKVDPSGKIHYIP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgaaacaattgcgtgctcccctccatgatgaatttgaaataccaaacattgca
catattactcgtggttttgcagttaaatcaatgcgccctccaaatttgatcaaagctcct
tttgaaataccagaaataacaaaattcgctaattatcaagatcaatttcaagatgcaatc
actcattgcttaactttagatcaagttggcttccaagtacaaaaaattgctcgcatttct
caaagtttatctttatccaaagattgtgccgaagctcatgaatttatttcaaagcaaatc
atagaattcgcaaagtcaatacctacagaaataagtaactgcagaacatacgaagagatc
ggtcaattttgggaaaaaattcaatcaaaactttcaatcacaactctttcgttttcatac
ttgtgtgtgaagtccttaggtcttcgtacataccgtgacatattcctggaagctctgcgt
aacgaatacactcaaaatcacgaattattcgaaactgtcgctaatatcatcatagaagca
tacaacgaatctagaaacgattgcagttccgaaaagctcaagatacacttcattttcctt
aacgataccggtctttttgatacattattcattgaaatgttaattaactcagttttatcg
ataattacgccagtaatcaaagaatcccttaataatggaatatcctcgtacctacatcaa
gctcaagaattgagtattcgtgaagaaaaacttgcatctccacttttgacacaaactcag
ctcagaaaactcacttcgagtgtcaataccgccatatttacctccaatctcaacaatttt
gttgctggtggcctccacgaattagttacaaacaacgataaagaatcaatttcgatttgc
gctcatttctcaacagcaacgaacactacatcgacatttactcaagatctagctcgtgtt
ttcgaggaagaagtctccaaatgcttcgaaaaagaagatccaattccagatatcataaat
ctctacaaagctctttcttctttcaatgccgcagcattcggaacaagtagtgcgagagtt
cttacgagcggatttgaacgtggcttcaaagttgacgatgaaaatactgcaagaaaactt
gaattatcaattcacaagtgttttccactccaagtatgcgatatttcaccatactatggc
ttgtttaagatgttgagatgcaaagataccttccaaagctatcattccttgtatttaaac
agaagatctctcgaatgcaagccagaacagcttgaaaacgacaagaagttcgctgataac
cttagagaaagttgcggtacaaggtatacagagccaattgaccagactttcgctgatatt
aatttatcttcttctctgaaaaagaaatttttcggaaaaataccaaactcccctgtaaaa
tcaattttctcccccttgattttgaagagggaacaatggcccacaatagaaccaataaca
ggcattgttcctgccgacatcaaacaatgcatggatgactttgaaacttatttcaaagtg
gaatgtcgtggaaaatccatacaatggacgatgcaattgacaaaagtatcattagagtgc
aaaggcttctctaatttaacggaattgacatgctctggtgttgttgcattagtgttgctt
tctattgctagtggaaacgactctgttgaaaagattattgaaaatactaaattaactgag
aaagatattcagaatgccattgctaagatgtctcagaggaagaatggaaaggtccttttg
aagcctttggccctcaatcctgaagctagtgtcgaaggaggaaaattagatgtattttat
tatgttcctgccactacatcgtcctctgcaaagattcctgttaattatgataagcagata
gaggctgcaatcatgaaaatcctcaaagaaaagcaaactcttgaaaaagaagaattaaag
ggagaagtttccaaatatcttccattcaagtttgaagataaagactttgacttaagaatt
aaggctttggatgctcaagcttatatcaaagtcgatccttctggaaaaatacattatatt
ccataa
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