Trichomonas vaginalis: 4753822
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Entry
4753822 CDS
T01022
Symbol
TVAGG3_0623050
Name
(RefSeq) transcription initiation from RNA polymerase II promoter
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tva
Trichomonas vaginalis
Pathway
tva03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4753822 (TVAGG3_0623050)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
4753822 (TVAGG3_0623050)
03036 Chromosome and associated proteins [BR:
tva03036
]
4753822 (TVAGG3_0623050)
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
4753822 (TVAGG3_0623050)
Coactivators
SAGA/TFTC/STAGA complex
4753822 (TVAGG3_0623050)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
4753822 (TVAGG3_0623050)
STAGA complex
4753822 (TVAGG3_0623050)
TFTC complex
4753822 (TVAGG3_0623050)
SAGA complex
4753822 (TVAGG3_0623050)
SLIK complex
4753822 (TVAGG3_0623050)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
ANAPC4_WD40
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_like
PROPPIN
Beta-prop_NWD2_C
eIF2A
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
4753822
NCBI-ProteinID:
XP_001308986
UniProt:
A2FGB0
LinkDB
All DBs
Position
III:complement(1843207..1845136)
Genome browser
AA seq
601 aa
AA seq
DB search
MDQSPMFGQFGFVNQNAFEFPIDSAKNPSSSLNQFIKNQNMNNIPNEIPKYYSDLKMWVN
SLSNISKPEVFSLLYAFFYNSIVVMMLSQTKRSIIKSFINDYSTDFVKDFAEEISSLTKL
VNTKSTAVNYRKFNVLMTKQSLLILISYLADNNQTLLLFLLNQYVNVKIISQEAQMLRLS
NGEPVFVSNIDSNSSSDLIVNLLADNPIDLSKEFLDSVNSKYESFSILDSSKKRTFPIEK
VPNVDMEQIMYTSLNIINMDRLSKNNLPTCGYFNFPKEHVYYDINDCGSLLSVCTGSAIT
KLYSLDVSVDLDNIVPISNPKNEKESSDFELINHFMVPRSSFTYKDHFSGQMKNSYFTRS
LIGQKSMFCTFSHDSSLLLTGGAFETRIWSAINSNSIISVQTPSINWCGDWNPYGEYYLL
GSSDGTASIYSFNSPKTVRSFVGHTKDVIDVKYHPNANIVASASLDGTIRLFDVSEGQQI
RAYSLQTTPTCISFHPSGRYLVCGDEKGGINVWDLSNDKKLLEIKDSHKDTTVSDLCISK
DGQVLASVGEDIAIWDFQAISSRLEVSEKPMKRTAAKESRPRRIKFTDTNLLLCIGETLS
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcgccaatgttcggacaatttggattcgtcaatcaaaatgcgtttgagttc
ccgatagattcagcgaaaaatccaagttcttccttaaatcaatttataaaaaaccaaaat
atgaataatataccaaacgaaataccaaaatactattcagatctaaagatgtgggtcaat
tcccttagtaatatatcgaaaccagaagttttttccttactttatgcgtttttctataat
tctatagtagtcatgatgctttctcaaacgaaaaggtcaataatcaagagttttattaat
gattattctacagatttcgtgaaagattttgcagaagaaatttcatcactcacaaaatta
gtaaatactaaatcaacagcagtaaattacaggaaattcaatgttctgatgacaaagcag
tcattattaatccttatttcttatttggctgataataatcaaacattgttgcttttcctt
ctgaatcaatatgtaaatgttaagattatatcacaagaagctcaaatgttacgcttatca
aacggagaacccgtttttgtctctaatattgactcaaattcgagttctgacctaattgtc
aatcttcttgcagacaatccgattgatttgtccaaagagttccttgattcagttaattcc
aaatacgaatctttctcaattttggattcatccaaaaaaagaacatttcctattgaaaaa
gtaccaaatgttgacatggaacagatcatgtacacatcactgaacataataaacatggac
agactgtctaaaaacaatttgccgacttgcggatactttaatttcccaaaagagcatgtt
tattacgatatcaatgattgtggatcattgttatctgtttgcacaggttctgcaataaca
aaactctattctttggatgtttctgttgatttagacaatattgttccaatttctaatcca
aagaacgaaaaagagtcatcagactttgaactgatcaaccatttcatggtccctcgcagt
tcttttacttacaaagaccatttttccggacaaatgaaaaattcttatttcacaaggtcg
ttgatcggccaaaagtcgatgttttgtacattttcgcatgattcatcactgcttctcaca
ggaggggcctttgaaacaaggatttggtcggcaataaactcgaattccataatttcagtt
caaacaccatcaattaactggtgcggtgactggaacccatacggggaatactatttactt
ggttcttcagacggaacagcttcaatttacagttttaattctccaaaaactgttagaagc
ttcgttggccacacaaaagatgtcattgatgttaagtatcatccgaacgctaacattgtc
gcttctgcttcgttggatggaacaattcgcttgtttgatgtttctgaaggccagcaaatc
agagcttattcgttacaaacgactccaacgtgtatctccttccatccgagcggaagatat
ctcgtttgcggagacgagaaaggcggaatcaacgtttgggacctttcaaacgacaaaaaa
ctgcttgaaataaaggacagccataaggacacaaccgtttctgacctttgtatatcgaaa
gacggccaagttttggcatctgtcggagaagacatcgctatatgggatttccaggctatt
tcatccagattggaagtgtctgagaagccaatgaagagaacagctgcaaaagagtctcgt
cctcggagaatcaaattcactgatacaaatttacttctttgcatcggcgaaacattatca
ttataa
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integrated database retrieval system
