Trichomonas vaginalis: 4754352
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Entry
4754352 CDS
T01022
Symbol
TVAGG3_0932020
Name
(RefSeq) transcription-dependent tethering of RNA polymerase II gene DNA protein
KO
K14298
mRNA export factor
Organism
tva
Trichomonas vaginalis
Pathway
tva03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4754352 (TVAGG3_0932020)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4754352 (TVAGG3_0932020)
03036 Chromosome and associated proteins [BR:
tva03036
]
4754352 (TVAGG3_0932020)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
4754352 (TVAGG3_0932020)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
4754352 (TVAGG3_0932020)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR75_1st
ANAPC4_WD40
Pectate_lyase22
Beta-prop_DCAF12
Frtz
KNTC1_N
Late_protein_L1
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
4754352
NCBI-ProteinID:
XP_001309509
UniProt:
A2FET2
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All DBs
Position
I:5074929..5076103
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AA seq
386 aa
AA seq
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MNSNYKYNYSGSSNTTAIAIDISKGPEDTISQLKFAHVSDKLLLFGSSWDGSLNAWKVDL
NSKSSNLVATHRESKQAILRIATNENENLYYFGTTEGAVKKVSIGEQGQDSKFVVNELFK
VPIQYPISGLAYCHEKKCLVVGAMDGTVYLYDAREKATPTAFLGTNNVFHLVGLDVGANK
AFVCYTDMAMTTIDIRQNIGAPVGQDEYPKLAYTDETSKNGNESQITCVAAFPDDGGYMT
GSITGKVVITSNGNQVKYDFHRRETERTIYSVNSVAISRKQTLGMSVGGDGTINYFNLGN
GTRTSTTESTTTKTIHDPITACAVDDNAEYAAYATGSDWARGYEEHEHIYLAPKLFIKKI
TDTEKGLKKTTTYGSSTYGSFGSMRK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaattataaatacaactatagcggatcatcaaatacgactgcaatagcaata
gatatctccaaaggaccagaagatactatttctcaactaaaattcgcccatgtatcagat
aaattattattatttggttcttcctgggatggatccctcaatgcatggaaagttgattta
aattccaagtcatctaaccttgttgccactcatcgtgagtcaaaacaagcaattttacgc
attgcaacaaatgaaaacgaaaatttatactatttcggtacaacagaaggtgcagtaaag
aaggtttcgatcggagagcaaggtcaagattctaaatttgtcgttaatgagttgtttaaa
gttccaattcaatatccaatcagcggccttgcatattgccatgaaaagaaatgtttagta
gtaggagcaatggatggaactgtttatctatacgatgctcgtgaaaaagcaaccccaaca
gcttttcttggcacgaataatgttttccatcttgttggtcttgatgttggtgccaacaaa
gcttttgtttgttatacagatatggctatgaccacaatcgacattcgccagaacatagga
gcccctgtaggacaagatgaatatccaaaactcgcatatacagacgaaaccagcaaaaac
ggcaacgaatcccaaattacctgcgtcgcagccttccccgacgatggtggctatatgact
ggctccatcacaggaaaagttgtaatcacaagtaatggaaaccaagtcaaatacgacttc
caccgcagagaaacagaaagaaccatctacagcgtgaactccgtagccatctctaggaag
caaaccctgggaatgtccgttggaggcgacgggacaattaattatttcaacctcggtaac
ggtacaaggacatcaacaacagaatctacgactacaaagactattcacgacccaattacg
gcttgcgctgtcgatgacaacgctgaatatgcggcatacgctacgggaagtgactgggcc
agaggttacgaagagcacgaacatatttatttggctccaaagcttttcattaagaaaatt
actgatactgaaaaaggtctcaagaaaacaactacttacggctcaagtacttatggatcc
tttggttcaatgcgcaaataa
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