Trichomonas vaginalis: 4754536
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Entry
4754536 CDS
T01022
Symbol
TVAGG3_0545670
Name
(RefSeq) transducin beta-like protein 3 family
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tva
Trichomonas vaginalis
Pathway
tva03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
4754536 (TVAGG3_0545670)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tva03009
]
4754536 (TVAGG3_0545670)
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
4754536 (TVAGG3_0545670)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_like
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
USP47_C
Beta-prop_LRRK2
PROPPIN
Clathrin_H_link
Phage_TAC_5
Motif
Other DBs
NCBI-GeneID:
4754536
NCBI-ProteinID:
XP_001309691
UniProt:
A2FEC1
LinkDB
All DBs
Position
II:14733131..14735420
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AA seq
749 aa
AA seq
DB search
MGKIKRSYVVEQSLQTRWGGGQIVKISSTHFATINNLEVYIIDSTSGNTAYKLEPNDESD
DRVVDVAVDTLLRFAITSHESMLLKFWTNSNDKWTVYKQWKFPGNNAPSLIIDPTARGFA
AITTNGGCYFYSVQTQKQIGKANIVNGQITSKAYDTTGQLWIGTNLGKLSIVDPKTLKTK
TLTDPQTSHTNRVTGIADVGDYIFTASLDEVILVFNREVELQKTVPVQYPIHFMVGDPKN
SLSCYCATSDGIKRVWLDDRSHIKKLNTTVATHLVYFETLFSCDENGILATVDLQDGVEP
HAIPLSLHSVYDATYDAKTETSSLATSSFHIIVTQKNNTHLLTGHTNIPLCVASMDGLLI
TGAKDNTARIWSLETFSLLSTLEGHSEAVTAVAFVPGTSNVVTASADHTVKMWRPGDGEE
ICRSALCNVVAHTKDINAIDVSSNGSMLATASRDKTCKLYKIEGDNLKLMRTLVGHTGAL
WTVAFSPVDKIVATGSRDNTVKIWNIEDGACLSTFTEFTASILRLRFATSGLQIIAAEGD
GIFKALRTKTGAIDFTSPQMHSDSVWALAVSNDGEHVLTGSEDGSMVLWRDNTEQLEAEE
LQHKAEVSEAEQELQNALRNGEYVKALRIALKLRMPAKLRSIVRMATEKGEGEALVEYFK
GVEDVDDYEQWLEYIAKWSTNGRWADDATASLSAILKVKPMKFFVENRKKLAENIDGIIP
YLERHMARLEKLHTQTYMIDHILDSTTLE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatcaagcgctcttacgttgttgagcagagccttcaaacacgctggggcgga
ggacagatcgtaaagatcagctcaacccattttgctacaattaacaatttagaagtttat
ataattgattcaacttcaggaaatacagcgtacaaactcgagccaaatgatgaatctgac
gatagagttgttgatgttgccgttgacacactccttcgctttgcaattacatctcacgaa
tctatgttacttaaattttggacaaattcaaacgacaagtggacagtttacaagcaatgg
aagttccctggcaacaatgcaccgtcattaatcattgatcctacagcaagaggcttcgct
gcaatcacaactaacggaggatgttacttctattccgttcaaacacaaaaacagatcggt
aaagccaatattgtaaacggccagattacttccaaagcatatgatacaaccggtcaactt
tggattggcacaaacttaggtaagctttcaattgtcgatccaaaaacacttaaaacaaag
acattaacagatccacaaacctcacatactaacagagttacaggaattgccgatgttggc
gattatatttttacagcatcacttgatgaagttattctcgttttcaacagagaagtcgaa
cttcagaagacagttccagtccaatacccaatccatttcatggttggcgatccaaagaat
tctttatcttgttattgcgccacatctgatggaattaagcgtgtttggcttgatgataga
tcacatattaagaagttaaacactacagtagccacccatttagtttatttcgaaacatta
ttttcatgtgatgaaaatggaattttagcaaccgttgatctccaagatggtgtagaacca
catgctattccattatccctccattccgtgtacgatgccacttacgatgccaaaacagaa
acttcatctttggcaacttcgtcattccacataattgtcacccagaaaaacaacacgcat
cttctcacaggccatacaaacattcctctgtgtgttgcttccatggacggacttctaatt
acaggtgcaaaagataatacagcaagaatttggtcgttggagacattttctttactttca
acattggaaggccacagtgaagcagtcacagcagttgcttttgtcccaggaacatcaaac
gttgttacagcgtcagcagatcacacagtaaaaatgtggagaccaggagatggcgaagaa
atctgcagaagcgctctttgtaacgtcgtagcccatacaaaggacataaatgcaattgat
gttagttcaaatggttcaatgttggcaacagcaagtcgtgacaaaacatgcaaactttat
aaaatagaaggcgacaatttgaagttgatgagaacattagttggccatacaggtgcattg
tggacagttgctttcagtcctgttgataagattgttgcaacaggatcaagagataacact
gtaaagatctggaatatcgaagatggcgcttgtttatcaacattcacggaattcactgct
tctattttgcgtttgagatttgcaacaagcggattgcaaatcattgccgctgaaggtgat
ggcatcttcaaggctttgagaactaaaacaggagcaattgatttcacgtcacctcaaatg
cacagtgattctgtctgggctttggctgtttctaacgatggagaacatgttttaaccggt
tctgaagacggatcaatggttttgtggagagataacacagaacaactcgaagcagaagaa
ctccaacacaaggctgaagtatctgaagctgaacaggaacttcaaaacgctctaagaaac
ggtgaatacgtaaaagctctcagaattgctttgaaattgagaatgccggccaaattaaga
tctatcgtcagaatggcgacagagaaaggagaaggagaagcgttagtagagtatttcaaa
ggtgttgaggatgttgatgattacgagcaatggcttgaatacattgcaaaatggtcaaca
aatggaagatgggctgatgatgctacagcttctttgagcgcaattttgaaggtgaaacca
atgaaattcttcgtcgagaacaggaagaaactcgcagagaatatagatggtatcattcct
tacttggaaagacacatggccagacttgaaaaactgcacacacagacttatatgatagat
catatcttagattcaacaactttagagtaa
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