Trichomonas vaginalis: 4754551
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Entry
4754551 CDS
T01022
Symbol
TVAGG3_0233560
Name
(RefSeq) pre-mRNA 3'-splice site binding
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4754551 (TVAGG3_0233560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
4754551 (TVAGG3_0233560)
Spliceosome [BR:
tva03041
]
Complex A
U2 snRNP components
U2 related factors
4754551 (TVAGG3_0233560)
Complex B
4754551 (TVAGG3_0233560)
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GFIT
Motif
Pfam:
RRM_1
zf_CCCH_4
zf-CCCH
Torus
Motif
Other DBs
NCBI-GeneID:
4754551
NCBI-ProteinID:
XP_001309706
UniProt:
A2FE85
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All DBs
Position
IV:36647580..36648449
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AA seq
206 aa
AA seq
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MSEEKLFCLQFEKTGVCLKGEMCNKPHRSDPMSRILLFKHLYPDPDVFLALLPTGSVTIS
DEEKQRAADAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTLN
NQYYAGRKVECVLTPISRLSNAICNESACPYGSTCNYVHPLKISEHITKICFPRSSRVYP
TQFRRAGKIKIATTPANILNGSFQAF
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaaaattattttgccttcaattcgaaaaaacaggagtttgtcttaaagga
gagatgtgtaacaagccacatagatcagatcctatgtcacgaattctgttatttaagcat
ttatatccggatccagatgtttttttagctttattgccaacaggttcagtaaccattagc
gacgaagaaaagcaacgtgcagctgatgcattttactatgatattttcttaatgtgccaa
cgtttcggaccagttgaagatattttaattgcttcaaataaaacagacatcatgaatggt
aatgtttatgtaagtttcaaagaagttgatgctgctcaagctgcatttttgactttaaac
aatcaatattacgccggaagaaaagttgaatgcgttttaacaccaatatcaagattatca
aatgctatatgcaacgaatctgcatgcccttatggatctacatgcaattacgttcaccca
ttaaaaatttcagaacatattacgaaaatttgttttccacgctcatccagagtatatcct
actcaatttagaagagctggaaaaattaaaatcgcaacaactcctgctaatattcttaat
ggttctttccaagctttttaa
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