Trichomonas vaginalis: 4754646
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Entry
4754646 CDS
T01022
Symbol
TVAGG3_0402240
Name
(RefSeq) histone deacetylase class I, eukaryotic type family
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03082
ATP-dependent chromatin remodeling
tva03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
4754646 (TVAGG3_0402240)
03083 Polycomb repressive complex
4754646 (TVAGG3_0402240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tva03036
]
4754646 (TVAGG3_0402240)
Enzymes [BR:
tva01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
4754646 (TVAGG3_0402240)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
4754646 (TVAGG3_0402240)
HDAC complexes
Sin3A-HDAC complex
4754646 (TVAGG3_0402240)
BRAF-HDAC complex
4754646 (TVAGG3_0402240)
REST complex
4754646 (TVAGG3_0402240)
SHIP complex
4754646 (TVAGG3_0402240)
MiDAC complex
4754646 (TVAGG3_0402240)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
4754646 (TVAGG3_0402240)
Heterochromatin formation proteins
Other heterochromatin formation proteins
4754646 (TVAGG3_0402240)
Chromatin remodeling factors
NuRD complex
4754646 (TVAGG3_0402240)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
DAG_kinase_N
Motif
Other DBs
NCBI-GeneID:
4754646
NCBI-ProteinID:
XP_001309799
UniProt:
A2FDZ0
LinkDB
All DBs
Position
V:25695602..25697021
Genome browser
AA seq
453 aa
AA seq
DB search
MSIPKRRIAYFYDEDIGNYYYTHSHPMKPVRVRMTHSLVLGYKLHEHMDVFHPRRASPEE
MMRFHTPGYIKFLQTATPSNTNPKSEDAVHYNIGFDCPVFDNIFEFCQISAGGSISAAQR
LNYNLADVAINWAGGLHHARRDQASGFCYIADCVLGIMELLKYHPRVMYIDIDIHHGDGV
EEAFYNTDRVLTVSFHKYGKEFFPESGHISDVGINSGKYYAVNVPLRDGMTDEAYHYLFK
PIIRNLIHFYQPGAIFLQCGADSLVGDLLGYFNLSTYGHGECVKFVQSFGIPLLVAGGGG
YIKQSVARCWTYETSLIVNQDIPDELPENDYLEYFQPSYKLHLHPDKKKNLNSEEFLHNI
YVHVMENVRHLAAAPSVQMTELPPRAAMSRPIKVHEETSNFCKRLFMKFQTEDDIQEQKE
QEEAQRMDDEEYAEKMSHEPNPNIPVKEPLPEM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccctaagcggaggattgcttatttttatgacgaagatattggcaattattat
tatactcatagccatcctatgaaacctgtccgtgttcgcatgacgcatagtcttgtgctt
ggctacaaacttcatgaacatatggacgtcttccatccacgcagagcatctccagaagaa
atgatgcgatttcatacaccaggatacatcaaattccttcaaacagcaactccatctaat
acaaatccaaaatccgaagatgcagttcactataatattggtttcgactgccctgttttc
gataatattttcgaattttgccaaatctcggctggtggaagtatcagcgctgctcaaaga
ttgaattacaaccttgcagacgttgcaattaattgggcaggcggcctccatcacgctaga
agagatcaggctagcggattttgttacatagccgattgcgtcctcggcattatggaattg
cttaaatatcatccacgcgttatgtatattgatattgatattcaccacggcgatggcgtt
gaagaagctttttacaatactgaccgtgttttaacggtttccttccataaatatggaaaa
gaattcttcccagaaagtggtcatatttcagatgtcggaattaatagcggtaagtactac
gcagttaatgttcctcttcgtgatggcatgacagacgaagcatatcattacttattcaag
ccaattatcagaaatctcatccatttctaccaaccaggcgcgattttcttacaatgcgga
gcagattcacttgtaggtgatcttctcggctatttcaacctttctacttacggacatggt
gaatgcgttaagtttgtccagtcatttggaattccacttcttgttgcgggcggtggcggc
tacattaagcagagtgttgctcgctgttggacatacgagacctcattaatcgttaatcaa
gatattcccgacgaattaccagaaaatgattatcttgagtacttccaaccatcatacaag
ctccacctccatccagataagaagaagaacctcaactccgaagagtttctccataacatt
tacgtccacgtcatggaaaacgtcagacatctcgcagcagctccttctgtacaaatgacg
gagcttccaccgagagcggccatgtcccgaccaattaaggtgcacgaggaaacctccaat
ttctgtaagagactgtttatgaaattccaaacagaagatgacatccaggaacagaaggaa
caagaggaagcacagagaatggatgacgaggaatacgctgagaagatgagccacgaacct
aaccctaatatacctgttaaagagccattacctgaaatgtaa
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integrated database retrieval system
