Trichomonas vaginalis: 4754703
Help
Entry
4754703 CDS
T01022
Symbol
TVAGG3_0371310
Name
(RefSeq) pseudouridine synthase protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tva03016
]
4754703 (TVAGG3_0371310)
Enzymes [BR:
tva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
4754703 (TVAGG3_0371310)
Transfer RNA biogenesis [BR:
tva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
4754703 (TVAGG3_0371310)
Prokaryotic type
4754703 (TVAGG3_0371310)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
4754703
NCBI-ProteinID:
XP_001309856
UniProt:
A2FDS7
LinkDB
All DBs
Position
V:complement(<20319764..>20320879)
Genome browser
AA seq
365 aa
AA seq
DB search
MGLIHSIACQDANPIKKQPKFPNLFYDAYGNQLKPHQTYIALCYGYLGTNYHGSSLHDQD
KTVTLELQEALVNLGVISPNRTKGALKWSESSRTDTGVHAAKQVATFRLVLPEGVKVKDL
PRLIQKQLSKNSPIRVWAAVKPGIIFNAQQSASSRRYHYLLPVNTFSSENIDHLNYLRAK
ICPIFVGRHQYANYTRHITDELLHTSIKTISEFTFTDPFDVNGTKYVLFTISGNSFMLNQ
IRKMIAAVLAVSHHLMTEDDLKDTLTETRWLLPRLIGTGLFLDQVFFEQNQIIRQHKDKP
IPKKKDIHFSFVSEEIEVWKRNILFNHIDQIVKEKDPFKEWVNNILLQFPPNKFNIDDQK
QEFSS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgatacattctatcgcttgtcaagatgcaaatcctattaaaaagcaacctaag
tttccaaacttgttctatgatgcatatggaaatcaattaaagccgcatcagacatatatt
gctctttgttatggttatttaggcacaaattatcatggttctagcttgcatgatcaagat
aaaacagttactttagaattacaagaagctttagtgaatttaggcgtaataagtccaaac
agaactaaaggagcattaaaatggtcagaatcttcaagaaccgatacaggcgtacatgct
gctaagcaagtcgctacatttagattagtattgcctgaaggagttaaagtaaaagactta
ccaaggcttattcaaaaacaattatccaaaaattctccaataagagtttgggcagcagtc
aaaccaggaattatctttaacgcgcagcaatcagcatcatctcgacgctatcattactta
ttaccagtaaatacattttcatcagaaaatatcgaccacttaaattacttaagagcaaag
atttgtccaatatttgttggaagacatcaatacgcaaactatacaagacatattaccgat
gaattacttcatacatcaattaaaacaatttctgagttcacttttactgatccatttgat
gtgaatggcacaaaatatgttttattcactatcagcggtaattcctttatgttgaatcaa
attcgaaaaatgattgcagctgttcttgctgtttctcatcatttgatgacagaagatgac
ttaaaagacacattgacagagaccagatggcttctcccgcgtcttattggcactggtttg
tttttggaccaagttttcttcgaacaaaaccaaattataagacaacacaaagacaaacca
attcctaaaaagaaagatattcatttctcatttgtttcagaagaaattgaagtttggaaa
cgaaatattctttttaatcacattgatcagatcgtcaaagagaaagatcctttcaaggaa
tgggtaaacaacattttactccagtttcctcctaataaattcaacattgatgatcaaaaa
caagaatttagttcataa
DBGET
integrated database retrieval system
