Trichomonas vaginalis: 4755548
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Entry
4755548 CDS
T01022
Symbol
TVAGG3_1006460
Name
(RefSeq) nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tva
Trichomonas vaginalis
Pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4755548 (TVAGG3_1006460)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4755548 (TVAGG3_1006460)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
4755548 (TVAGG3_1006460)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
4755548 (TVAGG3_1006460)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
4755548
NCBI-ProteinID:
XP_001310690
UniProt:
A2FBH3
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All DBs
Position
I:complement(18270711..18271444)
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AA seq
193 aa
AA seq
DB search
MSKSPISKKPAENEDFSDLFKMEMMPPAVPQQHISLQNPKKAKNDIQQYNKIIEEDNISR
EFEQSMKMVPDLPFDFVQYQPEDEKINPDFPKRPAMKLLQPEMFQYYDIYILFYIFYYFP
NSPYQYFAAKELKSRGWTFLNESQQWVHLISHVYETTDKDIIGKFEIFDRSPDVWDVVVR
NSYSISKQEINKD
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtctccaatttccaagaaacctgcagagaacgaagacttttctgatctgttt
aaaatggaaatgatgccacctgcagtacctcagcagcatatttccctgcaaaatcctaaa
aaagcaaaaaatgatattcaacaatacaacaaaattatagaggaagataatatttcaaga
gaattcgagcaatcaatgaaaatggttccagatttaccttttgacttcgttcaatatcag
ccagaagatgaaaaaataaatcccgactttccaaaacgtccagccatgaaattgttgcaa
ccagaaatgtttcaatactacgatatatacatattgttttatatattttattattttcca
aattctccatatcaatattttgccgcaaaggaattgaaaagccgtggatggacattctta
aatgaatcacagcaatgggttcatttaatttcccatgtttacgaaacaacagataaagat
attattggtaaattcgaaatatttgatcgtagtccagatgtatgggatgtagttgttaga
aattcatactcgatctcaaagcaagagattaataaggattag
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integrated database retrieval system
