Trichomonas vaginalis: 4756180
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Entry
4756180 CDS
T01022
Symbol
TVAGG3_0429280
Name
(RefSeq) RNA binding
KO
K13126
polyadenylate-binding protein
Organism
tva
Trichomonas vaginalis
Pathway
tva03015
mRNA surveillance pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4756180 (TVAGG3_0429280)
09123 Folding, sorting and degradation
03018 RNA degradation
4756180 (TVAGG3_0429280)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4756180 (TVAGG3_0429280)
03041 Spliceosome [BR:
tva03041
]
4756180 (TVAGG3_0429280)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4756180 (TVAGG3_0429280)
mRNA cycle factors
Stress granule specific factors
4756180 (TVAGG3_0429280)
Spliceosome [BR:
tva03041
]
Complex C
Other components
Complex C specific factors
4756180 (TVAGG3_0429280)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
DUF3587
Motif
Other DBs
NCBI-GeneID:
4756180
NCBI-ProteinID:
XP_001311313
UniProt:
A2F9Q3
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All DBs
Position
V:complement(<30189881..>30191543)
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AA seq
419 aa
AA seq
DB search
MDLNWKELFVGDLPGYVDGNFIKELFREYGNFPSGTITVKKHKSLDKSFAFVTFESHELA
RRALLEVNYTKLDGVPIRILWSDPATKRAIKKDFCTLIIFDLDEYIEAAQLHDIFSNFGE
VVSCKIPLTNGKPRGDGYVTFYKEEDAMRVKNDLAQASINGKPIQIVLYCKPTRKNSEET
FTNVFIKPLLVKYFKTNEDLAKLMKDFGEFVNPSIKFNDDGTSSEFGFCNFMYHQDAVKA
VESLNGKMHISGEFEFVCCRAQTKAERQAFLAEQSAEFRRRLYEETRGRNLYIKNIDRSI
NDEEFEEYFKQFGEVEKCLISREAQEPHESKGFGFVLFKTKEGAQNALKNTIITPLKGKI
LYVNYFIMKEEREHILPMDQPKTYLNFIKTKLSERGFPNKQKKKNSLFNLRRTSSRTLQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaactggaaagaacttttcgttggtgatctccccggctatgttgatgggaat
ttcatcaaagagcttttcagggagtacggaaacttcccatcagggacaatcacagtcaag
aagcataaatctcttgacaagtcctttgcttttgtcacattcgaatcccacgaattagca
agacgtgctcttttggaagtcaactacacgaaactcgatggtgttccaatccgtattctt
tggtccgatccagctacaaagagagccatcaaaaaagacttttgtactctcatcatcttc
gaccttgatgaatatattgaagctgcacagcttcacgatattttctccaacttcggcgaa
gtggtttcctgcaagatcccgttaacgaatggcaagcctcgtggcgacggctacgtcaca
ttctacaaggaagaagatgccatgcgtgttaagaatgatcttgctcaagcttctatcaac
ggcaaaccaattcaaattgtgttatactgtaagccaaccaggaagaactcagaagaaacg
tttacaaatgtatttatcaaacctttactagtcaaatacttcaaaacgaacgaagacctt
gctaaactcatgaaagattttggtgaatttgttaatccatctatcaagttcaatgatgac
ggaacaagcagcgaatttggtttctgcaatttcatgtaccaccaagatgccgttaaagca
gtagaatcactcaatggaaagatgcacatttcaggagagttcgaatttgtctgctgccgt
gcccagactaaagcagagcgccaagccttcttagcggagcagtccgccgagttccgccgc
cgcctttacgaagagacacgtggtcgtaacctttacatcaagaacatcgaccgaagtatc
aatgatgaagaattcgaagaatacttcaagcaattcggtgaagttgagaagtgcctcatc
agtcgcgaagctcaggagccacacgaatctaaaggtttcggctttgttcttttcaagaca
aaggaaggagctcagaacgctttgaaaaacacaattattactccactcaaaggcaagatc
ctatatgtcaattacttcataatgaaagaagagcgcgagcatattttgccgatggaccaa
ccaaagacatatcttaactttataaagactaaactgtcagagagaggattccccaacaaa
caaaagaaaaaaaattctctattcaatctcagaagaacaagctcaagaactctgcagtga
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