Trichomonas vaginalis: 4756355
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Entry
4756355 CDS
T01022
Symbol
TVAGG3_0236880
Name
(RefSeq) U6 snRNA-associated Sm-like protein Lsm1/8 family
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tva
Trichomonas vaginalis
Pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4756355 (TVAGG3_0236880)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4756355 (TVAGG3_0236880)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
4756355 (TVAGG3_0236880)
mRNA degradation factors
5'-3' decay
Lsm complex
4756355 (TVAGG3_0236880)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
4756355
NCBI-ProteinID:
XP_001311487
UniProt:
A2F979
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Position
IV:complement(37194949..37195753)
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AA seq
126 aa
AA seq
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MSTHDRDLRHKKLLAKEFDKYREDYKAKLNPEEYPGNMSLIFELDTKVCVITADDIEYVG
ELSSFDQFGNIILAKAVLRTFGPNGYDDEEKLGTIFIRSDQVILIGKVDKDKENKLLEVE
EEDADE
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacacgacagagacttgaggcataagaagcttcttgctaaggaattcgataaa
tacagagaagattataaggcaaagttgaatccagaagaatatccaggaaatatgtcactt
atcttcgaacttgatacaaaagtatgcgttattacagcagatgatattgaatacgtcggt
gaactttctagctttgatcaatttggtaatattattcttgctaaagctgttttacgtacc
tttggaccaaatggttacgatgatgaagagaagttgggcactattttcatccgcagtgat
caagttattctcattggcaaagttgacaaagataaagaaaacaaattactcgaagttgaa
gaagaagatgccgatgagtaa
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