Trichomonas vaginalis: 4758359
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Entry
4758359 CDS
T01022
Symbol
TVAGG3_0245260
Name
(RefSeq) nuclear pore complex assembly
KO
K14309
nuclear pore complex protein Nup93
Organism
tva
Trichomonas vaginalis
Pathway
tva03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4758359 (TVAGG3_0245260)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4758359 (TVAGG3_0245260)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
4758359 (TVAGG3_0245260)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
4758359
NCBI-ProteinID:
XP_001313467
UniProt:
A2F3F8
LinkDB
All DBs
Position
IV:complement(<38630546..>38633282)
Genome browser
AA seq
738 aa
AA seq
DB search
MSPYSNKKFMDPYSETTLDDLLTRSQNLERRTPFLVHQSLELISTETRATMSSIEDTEQA
KTRGKLLLAQEKADISRTHEILKGINHKNIVPRTVTSINDKTEQTMQNNIVSSITEIQTK
TSEICEEFIFKNITNRWNSDTKSHHFAYSQIRDEKTGFYIPYRIHRNSDYSRFINKSFLP
EEFASKIVKSAYTHYNLLEPDYLNIPLIDTFELISFLQESHSQLEQGVIKFLETQKKRVI
TQEVNRFLPVANRGGEFDFLPTVVSYINMHHSHLGESGLPWAIIYYLLRCGDISRAAEYS
TDNSREFSIYVVNFLRSMNNGISFEDNDRVENYLSSELSNIDANPFKIVSLSVMLHRNPG
HRDIIREFKNNDSESNSSEVIRSLEDWVWLRLHMKDSSINDLKSELEDNETESTVIQNPF
LSGQKLIMSGEFEKACQWFLSQEDNIDENIHIALALHLSGFVPSKSISQSLITYATEVED
LSKAVGYLSFLQDFDDKVKSLSIFIVEDERGLEILSQGTESHDNSIISEWLTPPEIYSVL
NLAGEEAEMRDEHCKAYKIFKMISRWDKVISNANIELRQCVEGFVDDISLDETNLLFLEI
IQKDDKTDLTDFESFKTMYYLAISSIELRHCHYSEACSAIDKSGLFPSTLEQVDSFNESI
RNRPEIVRRVFPTALENAMHAYSENFRSKSITGSSSDSDNMKILKKKSSALFELATVSNL
NISRETMRRILDYTIIFQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtctccatactccaataaaaaatttatggatccatatagcgagacaactctcgacgac
ttgttaacaagatcgcagaatctcgaaagaaggactccatttttagtacaccagtcacta
gaattgattagcactgaaacaagggcgacaatgagctcaattgaagatacagagcaagca
aaaacaagaggaaagcttttacttgctcaggagaaagcagatatctctcgaacacatgaa
attcttaaaggaatcaatcataaaaacattgttccaagaacagttacatcaatcaacgac
aaaacggaacaaacaatgcaaaataacattgtatcatctatcacggaaatccaaacgaaa
acatcagagatttgcgaagaatttattttcaaaaacatcacaaatcgatggaattcagat
acaaaatcacatcatttcgcatacagtcaaatcagagacgagaaaacaggcttttatatt
ccatatagaattcatcgaaattcagattattcacgattcatcaataaaagctttttacca
gaagaatttgcatcaaagattgttaaatccgcatatacacattacaatcttcttgaacca
gattatttaaacattccattgatcgatacatttgaattaatttcatttcttcaagaatca
cattcacaacttgaacaaggtgtcatcaaattccttgagacacaaaagaagcgtgttatt
acacaagaagttaatcgatttttaccagttgcaaatcggggtggtgaattcgattttctt
ccaacagttgtttcatacatcaacatgcaccattcacatttaggcgaatctggtcttcca
tgggccatcatttactatttacttcgatgtggtgatatttcacgtgcagccgaatactca
acagataattcacgtgaattcagtatttatgttgtcaactttcttcgaagtatgaataat
ggaatttcatttgaagacaatgatcgtgttgaaaactatctttcatccgaactttctaac
atcgatgctaatccattcaagattgtctctctttcagttatgcttcatcgcaatccaggt
catcgtgacatcatccgagaattcaagaacaatgattcggaatctaactcatctgaagtt
atccgatcattggaagactgggtttggcttcgcttacatatgaaagactccagtatcaac
gacttgaaaagtgaattagaagataatgaaacggaatcaacagttatccagaatccattc
ctttctggccaaaaacttatcatgtccggcgaatttgagaaagcatgtcaatggtttttg
tcacaagaagacaacatcgacgagaacatccacattgcacttgcattacacttatcagga
ttcgttccttctaaatctatctcacaatcattgatcacatatgcaacagaagtcgaagac
ctttccaaagcagtcggatatctttcatttctgcaagatttcgatgataaagttaaatct
ctttccatcttcattgtcgaagacgaacgtggtcttgaaatcctttcacaaggaacagaa
tcacatgataactccatcatctccgagtggcttactccacccgagatctattccgttctc
aatctagcaggtgaagaagcagaaatgcgagatgaacattgtaaagcatataagatcttc
aagatgatctcacgatgggacaaagttatttctaatgcaaacatcgaacttcgacagtgc
gttgaaggctttgttgatgatatttcacttgacgaaacaaatcttttgttcttagaaatc
atccagaaagacgacaagaccgatttaacagatttcgaaagtttcaagacaatgtattat
ttagctatttctagtattgaacttcgtcattgtcattattcagaggcatgcagtgctatt
gacaaatcgggtcttttcccatctacattggaacaagttgattcatttaatgaatccatc
cgaaacagaccagagattgttcgtcgtgttttcccaacagcacttgagaacgctatgcat
gcatactcagagaacttccgatctaaatctatcacaggatcatcatcagattcagacaac
atgaagattcttaagaagaagagctctgcattatttgaactcgctactgtttctaatctt
aacattagtcgcgagaccatgagaagaattctcgactatactattatctttcaatag
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integrated database retrieval system
