Trichomonas vaginalis: 4758576
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Entry
4758576 CDS
T01022
Symbol
TVAGG3_0342420
Name
(RefSeq) ubiquitin protein ligase binding
KO
K10609
cullin 4
Organism
tva
Trichomonas vaginalis
Pathway
tva03420
Nucleotide excision repair
tva04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4758576 (TVAGG3_0342420)
09124 Replication and repair
03420 Nucleotide excision repair
4758576 (TVAGG3_0342420)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tva04121
]
4758576 (TVAGG3_0342420)
03400 DNA repair and recombination proteins [BR:
tva03400
]
4758576 (TVAGG3_0342420)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tva04147
]
4758576 (TVAGG3_0342420)
Ubiquitin system [BR:
tva04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
4758576 (TVAGG3_0342420)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
4758576 (TVAGG3_0342420)
TCR (transcription coupled repair) factors
Cul4-CSA complex
4758576 (TVAGG3_0342420)
Exosome [BR:
tva04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4758576 (TVAGG3_0342420)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HTH_5
SUS_N
TetR-C_39
DUF4248
DUF5484
Motif
Other DBs
NCBI-GeneID:
4758576
NCBI-ProteinID:
XP_001313683
UniProt:
A2F2W1
LinkDB
All DBs
Position
V:15595942..15598271
Genome browser
AA seq
722 aa
AA seq
DB search
MKRKSPAGTIDSFFNASKEKKQASIDELMPIPRRQLTVQKTQQQKGVIHIQIPSLSDESS
INEDKIKEIMAYLKEGIHLLFDDKIQNANFAKLFTNVEYICRNKTPEYLYKSISEDMQEA
ALNFINSISEEFDITLISQKISLFEKCLDYFLRTFLYLDRSYIFPLRIDGFTSLSEIVYS
YIRNGMSKELADLISDQILITISKYRLHEEIKLSELKTGLNFAKSTKFYNDHLEPTLLIQ
TKDYFEDISSHLSLKDLINWNYSSKEIETQLQECGLEKSTYLSIDSMQNEIVLKKAGQRV
LFSQEFYDMIDQFDKEELKRVVSTFDKEELRKLLLKSVSSYFSTKIKSTIQSSTDQTLIP
DILRIISKISDFDQFIFENSRDAVKTINESVSASMSSQRDHIAEYLARYIDSGNPLVGPS
LILFKLIDASEVFESTYFHLFGRRFLSWNVDVQRENELIDTLQMNASKEYTDRLVKTIND
YNQSKRILQPTSDGMEYKAMALYERDWSTNEGEIKFPEQIEILNEEFKKRYMKQQKTDSH
IVLHFSAALSNCVLKVNNKSEIKMSGEQAIIVLLLSEKGPMNVDDIHNHTGINESQIKIN
LDILSKKPLNLLIKGDDDKWSVNKDAQFPENYSYPSTRSGNLQLQRAVIDNDINYIRTNM
IMSCMYKILKEFKTLKLEELISRVKKQLNFFPETEKLMFVINDLKNKDVLTQDENHVIRY
VP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaagtcaccagcaggaaccattgattctttctttaatgcatcaaaagaaaag
aagcaggcttccattgatgagttaatgcctataccccgcaggcaattgactgtacaaaaa
acgcagcaacaaaaaggagtaattcatatacaaattccttcactttcagacgaatcatcg
atcaatgaggataaaataaaagaaattatggcatatctcaaagaaggaattcatcttctt
tttgatgataaaattcaaaatgcaaattttgcaaaactctttacgaatgttgaatacatt
tgtcgtaacaagactccagaatatctttacaagtcaatttctgaggatatgcaagaagct
gcactgaattttatcaattccatctcagaagagttcgatatcaccttgatatcccaaaaa
atatcattatttgagaaatgccttgattatttcctccgtactttcctatacctcgatcgt
tcttatatatttccactgagaattgacggattcacaagtttgtcagagatagtctactcg
tatatcagaaatggaatgagcaaagaacttgctgatctcatttctgatcagattctcatt
actatttcgaaatatcgtcttcatgaggaaattaagctctctgaactcaaaacaggcctc
aattttgccaaatctacgaagttctacaacgaccatctcgaacctactcttctaatccaa
acaaaagattatttcgaagatatatcttctcatctcagtctaaaagacctaattaactgg
aattacagctccaaagagatagagacacaacttcaggagtgtggtcttgagaaatccact
tatttatccattgattccatgcaaaatgaaattgttctcaaaaaagccggccaaagggta
cttttttcacaagaattctatgatatgattgatcaattcgacaaagaagagctcaaaaga
gttgtttcgacctttgacaaagaagaattgcgaaaattattattaaagtccgtttcctca
tatttttcgaccaaaatcaaatccacaatacagagttcaaccgatcagacccttattcca
gacattttgcgcattatttcgaagatatcagattttgatcaatttattttcgaaaattcg
cgtgatgcagtcaaaaccatcaatgaatctgtatcagcgtccatgtccagtcaaagagac
cacattgctgagtatcttgcccgttacattgacagtggcaatccattagttggcccgtca
ttaattctattcaaattaatcgacgcgagtgaggtttttgagagcacgtacttccactta
tttggtcggagatttttatcatggaatgtcgatgtccaaagggagaacgagttgatagat
acactccaaatgaatgcatctaaggagtacactgatagattggtcaaaacaatcaacgat
tataatcaaagtaagagaatcttgcagccaacgagtgatggaatggaatacaaggcaatg
gcattgtacgaaagagactggagtacgaatgaaggcgaaattaagttcccagaacaaatt
gaaatattaaatgaagaattcaagaagagatacatgaagcaacagaagactgatagtcac
atagtgttacacttctcggccgcactctccaattgcgttttgaaggtaaataataaaagt
gaaatcaaaatgtcgggagaacaggccataattgtattactactatcagaaaaaggtcct
atgaatgttgacgacatccacaatcatacaggaatcaacgaatcccagataaaaataaat
ttagatattttatctaaaaaaccactgaatttgttgataaaaggtgatgatgataagtgg
tcagttaacaaagatgctcaattccctgagaattacagttatccgtcaacaagaagtgga
aatcttcagttgcaaagagctgttattgataacgatatcaactacataagaactaatatg
attatgtcatgtatgtacaagatattgaaagaatttaagaccctgaagttggaagaactc
atttcaagggtaaagaaacagttgaacttcttccctgaaacagagaagttgatgttcgta
ataaatgacctcaaaaataaagatgtgctgactcaggacgaaaaccacgtaattagatac
gtgccttaa
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integrated database retrieval system
