Trichomonas vaginalis: 4759667
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Entry
4759667 CDS
T01022
Symbol
TVAGG3_0816410
Name
(RefSeq) RNA binding
KO
K13126
polyadenylate-binding protein
Organism
tva
Trichomonas vaginalis
Pathway
tva03015
mRNA surveillance pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4759667 (TVAGG3_0816410)
09123 Folding, sorting and degradation
03018 RNA degradation
4759667 (TVAGG3_0816410)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4759667 (TVAGG3_0816410)
03041 Spliceosome [BR:
tva03041
]
4759667 (TVAGG3_0816410)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4759667 (TVAGG3_0816410)
mRNA cycle factors
Stress granule specific factors
4759667 (TVAGG3_0816410)
Spliceosome [BR:
tva03041
]
Complex C
Other components
Complex C specific factors
4759667 (TVAGG3_0816410)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_Nup35
RRM_3
Nup35_RRM_2
RRM_10
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
4759667
NCBI-ProteinID:
XP_001314386
UniProt:
A2EZR7
LinkDB
All DBs
Position
VI:<6462305..>6463245
Genome browser
AA seq
307 aa
AA seq
DB search
MMPLPPRTPLRQPKDNAIHVSNLPISATVEFIRTLFSECGTVINVFLKNKPTGSYCFVEF
ADKEEAEKAVRDFNYTKLNGESIVITLTNHGIMQRIVSGEGNLFVRGIDESIEAPQLHEL
FSHFGEVISCKIPVLNGKPRGYAYVQFANPADGDRAMKELADSTINGKAITIEKFINRGM
RQPNKATEQNIATDPTFTNIFIKNLPESINTLLDLLRLFQEYGQVVSARIVPEKRSGFAK
MIDHESAVRAVLGLNGRVIYGHTISCCRSLSLSERAAFMNRNNEEEQAVEEPNNMEQPED
SNSMPEE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccttaccgcctcgtacgccattaaggcaaccaaaagataatgcaattcatgtc
tcaaaccttccaattagtgctacagttgagtttatccgaactttgttctcggaatgcggt
acagtcattaacgttttcctcaaaaacaagccaaccggctcttattgctttgttgagttt
gccgacaaagaggaggctgagaaagcagtaagagatttcaactatacaaaacttaatggt
gaatcaattgttattacattaacaaatcatggcattatgcagagaattgtttccggtgaa
ggtaacctcttcgtaagaggtatcgatgagtctattgaagcccctcaacttcacgaatta
ttttcccatttcggagaagtaatttcatgtaagatcccagttttgaatggaaagccacgt
ggttatgcatatgtgcaatttgcaaacccagcagacggtgatcgcgctatgaaagagctt
gcagattcaactattaatggaaaggcaattactatagagaaatttattaatcgtggaatg
cgtcagccaaataaagcaacagaacaaaatatcgctacagatccaactttcacaaatatc
ttcatcaaaaatcttccagaatcaattaatactctcctcgatctcttgagattattccaa
gaatacggacaagttgtttctgctagaattgtcccagaaaagcgttccggatttgcaaaa
atgatcgaccacgaatcagctgttcgcgctgttctaggcttgaatgggcgtgtgatttac
ggacatactatctcatgctgccgttccctttcactctccgaaagagccgcatttatgaac
agaaataacgaagaagagcaagcagttgaagaaccaaataatatggagcagccagaagat
agcaatagtatgcctgaggaataa
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