Trichomonas vaginalis: 4760249
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Entry
4760249 CDS
T01022
Symbol
TVAGG3_0413650
Name
(RefSeq) pre-mRNA processing protein 8 (Prp8)
KO
K12856
pre-mRNA-processing factor 8
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4760249 (TVAGG3_0413650)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
4760249 (TVAGG3_0413650)
Spliceosome [BR:
tva03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
4760249 (TVAGG3_0413650)
Complex C
U5 SnRNP specific factors
4760249 (TVAGG3_0413650)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
UFSP2_MPN_insect
Motif
Other DBs
NCBI-GeneID:
4760249
NCBI-ProteinID:
XP_001330664
UniProt:
A2EY65
LinkDB
All DBs
Position
V:complement(<27592532..>27599545)
Genome browser
AA seq
2320 aa
AA seq
DB search
METGDTGVLQERIAQWKHLRKKHFKLEKIKTTSKGPSAKELPPGHIRQIMTSHGNMSHDK
FAGQKRLYIGALKYAPHAVLKFLENMPMPWEELRKVRVLYHTAGALTFVNEVPRVVPPQY
LAQWAETWIAMRREKRDRHQIRRLRFPPFDDEEQPLDFVTNIEGVEPPEAILMELDEDED
AAVYEWFYDYLGLPSQYINGLSYRKWKLPLTVMSTLYRLARPLVDQYEDPNSKYLIDLPS
LFTSKALNEVIPGGPRFEPLFTDVDPNQEWTEFNDINKIIIRTPISTEWKIAYPNLYNNR
PRKISIAPYHYPLSCFAKYNTIITPVFQLAPNLSSISRPRANNNPEQASEEDLQPFTVNC
DPLFNDLDHESEEKQFKIFDTLSLFWAPSPFNCRTGNTQRAQDVPLIRPWYTQRAPWKQP
VKVRVSYQKLLKNYVLNRSHHRKQYVVRRRKTITKIFKTTPYFQSTTLDWVEAGLQVVQQ
GYNMCNLLIKRHRLVFLHLDYNFNLKPIKTLNTKERRKSRFGNAYHLMREFFRFTKLLLD
CHIQYRLGQIDAYVLADALQYVFSHAGHLTGMYRYKYKLMHQVRTCKDLKHVLYSRFNTG
EVGKGPGVGFWGPMWRVWVFFMRGSIPLMERWLGSRVAREYEGRFSKRLPSTVTKQRVES
NYDIELRASVLHDITDTMPEGIRNAKAHTVLAHMSEAWRCWKANIPWKVPGLPPPLEAII
LRYVKAKADWWTKNAHYARERIARDGTVDKAITRKNTGRLTRLYLKQQSDYQANYLKEGP
YITPEQGVAMLTTMQNWLEMRQFTPIPFPPMQYKHDTKMLILALENMRFGHDVSMRMNQT
LREELGLIENAHDNPHEALIRIKRDFMTARAFREVKFTFLEHYTRVIPNYEIYALEKMTD
AYLDQYLWYEADRRHLFPPWVQPSDLIPPPVLVHKWCERINSLVDAWNTEDGQTMVLVET
SLEKFYEQIDLTFLNYMLRLVVDHNLADYMTSKNNVKISFKDMSYLNGVGLIHGLQFTSF
IAQYMGLLVDLLILGLRRANEMCGPPSMPNSLFQFASIEDEIRHPIRMYQRYATRIHILY
KFNAEQARDLIRDYCDVNSNNNDEMLGYNNKTCWPKDARMRLIKHDVNLGRAVFWDLQNR
LPRSLCEVNWNSSENSASGFHQSFASVYSKDNPNLLFYMCGFEVRILPKIRLEREDFTPQ
EGTWVLQNEITHETTAFVFLRVSEKSITYFRNRVRTILLSSQATTFMKVSNKWNTAIIAL
VVYFREALVATPELIDEIVKCENRVQTRVKLGLNSKMPNRFPPVVFYAPKEFGGLGLISM
GHVLIPQSDLRYATQTMAETTHFRDGMDHPEENFIPALYRYVQSWEGEIEDSKRVWQHYT
NMRKEAGALNKKITIEDLDSLWDRGIPRINVLFQRDRHTLAYDKGWRTRLYFKKYSLFKT
NPYAWTHHHHDGKLWNLKDYRADVIQALGGVEGILSHSIFKATGYKHWEGLFWDNTTGFE
EALKYRKLTNAQRQGMSQVPNRRYTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPSLK
VSLIQLFRGHMWQKTHESIVMDVMQVLDSHLSQLQIDYITKETIHPRKSYKMNSSCADLI
MISQNKWPSTEPCFVNETKTFHGEFLTTRFWVDIQLRWGDYDMHDIERYTRSLFYAYTSG
TQSMYPSSTGIIIGVDLCYNEWTAFGTWIPGLQELIDKAMKHVLQFNPSISVLRERVKKS
LQLYTSEIPEPALNSTNFGELFGNKITWIVEDKHVYRVKIQKTFEGNYTTSPVNGGVFIM
NPATGQLFLKIITTKAWQQQKRLQQLAKWKAAEETCALVRTLPPEEQPKQVICTSELLLD
PVQSYLSEFPNTVVKGSDMDLPLPAFMKIPKIAEEVIHAPEPKMVLYNLYDDWLDTVSPH
AAFRRLMLILRALLMERMKAWDILRPSANVVTQQNHLWPTHSADEWAEVEIRLKDLVIDI
YCQRNNVSANSLTQSEIRDIILGVKIAAPSEERQQMAKEVEEEDKAALKTVTTATRDADG
NQHIIQTFSQYEQQQFKSKSDWRSRALTSRGLVMRANTLMIPPPVVKPKLELIIPENIYR
RFVEISDPYMQICGFLFGVKMNDTLQVISIVIPPQNGDRDEIDFKQILPNHDFLDGASPI
GFIHTRVGENSSLEPSDAKVLASLCKKNPKIDSDNFANVVISFPVGGCIMAASTLSREGF
EWAETNIGMDNPKDFDDNFAKVLGISITNEINGWMMAPENGIWNYSFNSLRLQSVPDNYP
ISVQNPKTFFDMYHRVQHFTSFKREMNGEELSIDVDNNFI
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atggagactggagacactggggttttacaggaaagaatagcccagtggaaacatctccgt
aaaaaacattttaagcttgagaaaatcaagacaacttcaaaaggtccaagcgcaaaagag
ctcccaccaggccatattcgacaaattatgacatctcacggaaatatgagtcatgataaa
tttgcaggacagaaacgtttatacattggagcactgaaatacgctccacatgcagtttta
aaatttctcgaaaatatgccaatgccttgggaagaattacgaaaagttcgcgttttatat
cacacagcaggcgcgcttacatttgttaatgaagttcctcgtgttgtaccacctcaatat
ttagctcaatgggctgaaacatggattgcaatgagaagagagaaaagggatcgtcatcag
atccgccgtttacgtttcccgccatttgatgatgaagagcaaccccttgatttcgttaca
aacatcgaaggagtggagcctccagaagcaattttaatggaactcgatgaagacgaagat
gcggctgtttacgaatggttttacgactacttaggcttaccatcccaatacattaatggt
ttatcctacaggaaatggaaattacctcttactgttatgtctacactatatcgacttgca
agaccacttgttgatcaatacgaagatccgaactcgaagtatctcatcgatctaccatca
ttatttacttcaaaagccttaaatgaagtaattccaggtggtccaaggttcgaaccactc
tttacagacgtcgatcctaatcaggaatggaccgaattcaacgacatcaacaaaatcatc
atcagaactccgatttctacagaatggaaaatagcatatccgaatttatacaataacaga
ccacgcaagatctcaattgctccataccattatccactttcatgtttcgccaaatacaat
accattattacaccagttttccagttagctccaaatctttcttcaatttcacgaccacgt
gcgaacaacaacccagaacaagcatcagaagaagatctccagccattcactgttaattgt
gatcctttgttcaacgatctcgatcacgaatccgaagaaaaacaattcaaaatttttgac
actttgtcacttttttgggctccatcaccctttaactgccgaacaggtaatacacaaaga
gcgcaagatgtaccacttatcaggccatggtacacacagcgcgctccttggaaacagcct
gtcaaagtcagagtatcttatcagaaattgctgaagaactacgtattgaacagatctcat
cacaggaagcaatacgttgtaaggcgtaggaagacaatcacaaagatcttcaaaaccacg
ccttatttccagtcaacgacattagattgggtcgaagccggtctacaagttgtccaacaa
ggctacaacatgtgtaacttgttgatcaaacgccatagacttgttttcctccatctcgac
tacaatttcaacttgaaaccgataaaaaccttgaatacaaaggaaagacgtaaatcaagg
tttggcaacgcttaccatctcatgcgtgaattcttcagattcaccaaactgttactcgat
tgccacatacagtacagacttggccaaatcgatgcttatgttcttgccgatgctttgcaa
tacgttttctcacatgcaggacatttgacaggaatgtacaggtacaaatacaaactcatg
catcaagtcagaacatgcaaagacttgaaacatgttttgtattcaagattcaacacaggc
gaagttggaaaaggccctggagttggattttggggtccaatgtggcgtgtttgggtcttt
ttcatgagaggatccattcctttgatggagagatggcttggcagcagagttgcaagagaa
tacgaaggaagattctctaaaagattgccatcgactgtcacaaaacaacgcgttgaaagt
aattacgatatcgaattacgcgcatcagttttacatgatataactgatacgatgcctgaa
ggaatcagaaacgccaaagcacacacagtattagcacatatgagtgaagcatggcgttgc
tggaaagcgaacattccatggaaagttcctggccttcctccgcctttggaagccatcatt
ttgagatacgtcaaagcaaaagcggactggtggacgaagaacgcgcattacgcgagagaa
agaatcgcaagagatggaacagtcgacaaagcaatcacaagaaagaacacaggaagattg
acaaggctctatttgaagcaacaaagcgattaccaagcgaattacctcaaagaaggtcct
tacatcactcctgaacaaggtgttgcgatgttgacaacaatgcagaattggttggaaatg
agacaattcacgccaattccgttcccaccaatgcaatacaaacatgacacaaaaatgctc
attttggctctcgaaaacatgagatttggtcatgatgtatcaatgagaatgaaccagaca
ttgcgtgaagaactcggtttgatcgaaaacgctcatgataatccacatgaagcgttgatc
agaatcaaaagagatttcatgacagcgagagcgtttcgtgaagtaaaattcacgtttttg
gaacattacacacgtgttattccgaactacgaaatctacgctctcgagaagatgactgat
gcttacttggaccagtatctttggtacgaagcagacagaagacatcttttccctccatgg
gttcagccaagcgatttgattcctccgccagttttagttcacaaatggtgcgaaagaatc
aactctttagtcgacgcatggaacacagaagatggacaaacaatggttctcgttgaaaca
agccttgaaaagttctacgaacaaattgatttgacatttctcaattacatgttgagattg
gtcgtcgaccacaatttggctgattacatgacatcaaagaacaatgtcaagatctctttc
aaagacatgtcttatttgaacggtgttggattaattcacggtcttcagttcacttctttc
attgctcaatacatgggattgctagttgatttgctgatccttggtttgagaagagcaaat
gaaatgtgtggacctccttcaatgccaaactctcttttccagttcgcgtcaatcgaagac
gaaatcagacatccaataagaatgtatcaaagatacgcaacaagaatccacattctctac
aaatttaatgcggaacaagcaagagatttgatcagagattattgcgatgtcaactcaaat
aataacgatgaaatgttgggctacaataataaaacatgttggccaaaggacgcaagaatg
agattgatcaaacacgatgtaaatctcggaagagcggttttctgggatttacaaaaccgt
ttgccaagatcgttatgtgaagtgaactggaattcgagtgaaaacagtgcaagtggattc
catcaaagtttcgcatccgtttattcgaaagacaacccgaatttgctcttttatatgtgt
ggattcgaagtcagaattcttccaaagatcagattggagcgcgaagactttactccacag
gaaggaacatgggttttgcagaacgaaatcacccatgaaacaacagctttcgttttcttg
agagtttctgagaaatcgataacttatttcagaaacagagtcagaacgattttgctcagt
tcccaagcaacgacattcatgaaagtatccaataaatggaacacagcaatcattgctttg
gttgtttacttcagagaagctttagttgcaacaccagaactgattgacgaaatcgtgaaa
tgcgaaaacagagttcaaacacgtgtaaaactcggattgaactcaaaaatgccgaacaga
ttccctcctgttgttttctacgctccaaaagaatttggtggccttggattgatatcaatg
ggacatgtcttaatcccacaatcagatctgagatacgccacacaaacaatggcagaaaca
actcatttcagggacggaatggatcatcctgaagaaaatttcattcccgctttgtacagg
tacgttcaaagctgggaaggcgaaatcgaggattctaaaagagtctggcagcactacaca
aacatgaggaaagaagccggtgctctcaacaagaagatcacaattgaagacctcgattct
ctttgggacagaggaattcctcgcatcaatgttctcttccaaagagacagacacacattg
gcttacgacaaaggatggcgtacacgtctttatttcaagaaatacagcttgtttaagacg
aatccttacgcatggacacatcaccaccacgatggaaagctttggaacttgaaagactac
agagcagatgtcattcaagcacttggaggtgtcgaaggcatcttaagtcattcgattttc
aaagcaacaggttacaaacactgggaaggtttgttctgggataatacaacaggatttgaa
gaagccttgaagtacaggaaacttacaaatgctcaaagacaaggcatgagtcaagttcct
aacagaagatacacattgtggtggtcaccaacaataaacagagcaaatgtttatgttggt
ttccaagtacaattggatttaactggtattttcatgcacggaaaaatcccatctcttaag
gtttctttgattcaattgtttagaggccacatgtggcagaaaacacatgaatcaattgtc
atggacgtcatgcaagtgttggacagccatttgagccaattacaaatcgattacatcacg
aaggaaacaattcatccaaggaaatcatataaaatgaattcttcctgcgcggatttaatc
atgatctcccagaacaaatggccatcgacagaaccatgtttcgtcaatgaaacaaagaca
ttccacggtgaattcttgacaacaaggttctgggtcgatatacaattgagatggggagat
tacgacatgcatgatatcgagagatacacgagatctttgttctacgcgtacacaagtgga
acacaatcgatgtatccaagttctactggtatcataattggcgttgacttgtgttacaac
gaatggacggctttcggaacatggattcctggtttgcaagaattaattgacaaagcaatg
aaacacgtcttgcaattcaatccttcgatatccgtgttgagagaaagagtcaagaaatcg
ttgcaactctacacaagcgaaatccctgagccagcattgaattccacgaactttggcgag
ttgtttggaaacaaaataacatggattgttgaagacaaacacgtttacagagtgaaaatc
cagaaaacattcgaaggaaactatacaacgtcacctgtaaacggaggtgtcttcataatg
aatccagcaacaggacaattgttcttaaagatcattacaacaaaggcatggcaacaacag
aagagattgcagcaattggccaaatggaaagctgctgaagaaacatgcgctttagtaaga
actttgccaccagaagaacaaccgaaacaagtaatttgtacatcagaattattacttgat
cccgtccaaagttatttgtcagagtttccaaacacagttgtcaaaggatcagacatggat
ttgcctctcccagctttcatgaaaatcccgaaaattgcagaagaagtcatccacgctcca
gagccaaaaatggtcctttacaacctttacgatgattggttggacactgtttctcctcat
gctgctttcagaagattaatgttgattttaagagcattgttaatggaaagaatgaaagca
tgggatatcttgagaccttccgcgaatgttgtcactcaacagaaccatctctggccaaca
cacagcgctgatgaatgggctgaagtcgaaatcagactcaaagatctcgtcatcgatatc
tattgccaaagaaataatgtttctgcaaacagtttgacacaatccgaaattagagacata
attttaggtgtcaaaatcgctgctccttcagaagaaagacaacaaatggcaaaggaagtc
gaagaagaagacaaagcagctcttaagactgtaacaacagctacaagagatgcagatgga
aaccaacacatcattcagacattttctcaatacgaacaacagcaatttaagtctaaaagt
gattggagatctcgtgctttgacaagtagaggccttgtaatgagagcaaacactttgatg
attcctccgcctgttgtcaaaccaaaactcgaattgataattcctgaaaacatttacaga
agatttgtcgaaatttccgatccttacatgcaaatttgtggatttttgtttggtgtcaaa
atgaatgacacactacaagtcatttccattgttattcctcctcaaaacggagatcgcgat
gaaattgacttcaaacagatccttcctaatcacgacttcttggatggagcaagtccaatt
ggatttatccacacaagagttggagaaaacagttcccttgaacctagtgatgcaaaagtc
ctcgcaagtctttgcaagaaaaatccgaaaattgattccgacaactttgcaaatgttgtt
atttcattccctgttggcggatgcatcatggctgcatcgacattgagtagagaaggattc
gaatgggcagaaacaaacatcggaatggacaatccaaaggatttcgatgacaactttgca
aaagttcttggaatatcaataacaaacgaaataaatggctggatgatggctccagagaac
ggaatatggaactattcattcaattcattgagattgcagtcagttccagataattaccct
atttctgtgcagaatccaaagactttcttcgacatgtatcatcgcgttcaacatttcact
tcattcaagagagaaatgaatggagaagaactatcaattgatgttgacaataatttcatt
taa
DBGET
integrated database retrieval system
