Trichomonas vaginalis: 4760254
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Entry
4760254 CDS
T01022
Symbol
TVAGG3_0413740
Name
(RefSeq) transcription initiation from RNA polymerase II promoter
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tva
Trichomonas vaginalis
Pathway
tva03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4760254 (TVAGG3_0413740)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
4760254 (TVAGG3_0413740)
03036 Chromosome and associated proteins [BR:
tva03036
]
4760254 (TVAGG3_0413740)
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
4760254 (TVAGG3_0413740)
Coactivators
SAGA/TFTC/STAGA complex
4760254 (TVAGG3_0413740)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
4760254 (TVAGG3_0413740)
STAGA complex
4760254 (TVAGG3_0413740)
TFTC complex
4760254 (TVAGG3_0413740)
SAGA complex
4760254 (TVAGG3_0413740)
SLIK complex
4760254 (TVAGG3_0413740)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
TFIID_NTD2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Frtz
Beta-prop_IP5PC_F
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
4760254
NCBI-ProteinID:
XP_001330669
UniProt:
A2EY70
LinkDB
All DBs
Position
V:complement(27607966..27609851)
Genome browser
AA seq
610 aa
AA seq
DB search
MNSQPVQNYGNGIHGAQQPAADQNDIYKIALREMIKNEDVSKLPEQYDAVKNWIITSFPP
ESIQYRELYKILYAFFFHSIIIMSERGVDKQVVTKFMNRNTGDHHRYHDQSKLKKAVANN
ACPKLADNGFSLKITKTSFNTLTSFLEENYFYTFLGIIQDRLHVTYIPYEKILNSPESIP
EFILPDNAKNPERRDPTLSLLKDNLIDLINQRIETIYPDEETANRLKISLFDDDTSKRTP
QVVNLPKIPVEQILAGTMQAQLMAKLNKSELPACAYFTFPTHDQYYDINDDGTLISVCTG
TGITKLISTNVYTDLDDLFLYKGVTAQNEKTGPGFELLNQMMVPRYPIKNKQSYGAEVYT
YFNRNLIGPKPYWCKFSPNSRYLMTGGLGHVRVWNCENSIVLQEYHTPFNVNWCGDWSPF
NHQIAIGCEDPVALLYDTSRQEPIRVFTQHNKPIVDLKFHPNSSLLATCSCDCSIHLWDM
RDGMSLRQLADRMNVPRCMQFTRNGKLLISGDDSGAITSWDLAEGNKLGHIMAHNGPVRE
IAISVEGTIVASVGQEGDILLWDIENFRTSAIAQAKPLKRLQPRYADTRRIKFSNTNLLL
ALGSQCPAKA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtcaaccagtccaaaattatggcaatggcattcatggggctcaacaacctgct
gcagatcagaatgatatatataaaatcgctttacgagaaatgattaaaaacgaagacgtt
tcaaaattacctgaacagtacgacgcggtcaagaattggataatcacgagcttccctcct
gaatcaatccagtaccgtgaactatacaaaattctttacgctttttttttccattccatt
attataatgtcagaaaggggtgttgataagcaggtagtaaccaaattcatgaatagaaat
acaggtgatcaccacagatatcacgatcaaagcaagctcaaaaaggctgttgcaaataat
gcttgtcctaagctcgccgacaatggttttagcctcaaaatcactaaaacatcgttcaac
acccttactagctttctcgaagagaactatttttatacatttctcggtataattcaagat
cgtttacatgtcacttatattccttacgaaaagatcctcaattctccagaatccatacca
gagttcattctccctgacaatgcgaagaacccagaaaggagagatccaactctttccctt
cttaaagacaatttaattgatctcatcaaccagcgcattgaaactatttacccagatgaa
gaaaccgctaacagacttaagatttccctctttgatgacgatacttctaagagaactcct
caagttgtaaatttaccaaaaattcctgttgaacaaatccttgcaggaaccatgcaagca
cagcttatggccaagcttaacaaatccgagctcccggcctgcgcatattttacttttcct
actcatgatcaatattatgatataaatgacgacggaacattaatttctgtatgcacaggt
actggcattactaagctcatcagcacaaacgtatatacagacctcgacgacctcttttta
tacaaaggagttacagcacaaaacgaaaagaccggtccaggcttcgaactcctcaatcaa
atgatggttcctcgttatccaatcaagaacaagcaatcctacggcgcggaagtctatact
tacttcaatagaaatcttattggtccgaaaccgtactggtgcaagttttctccgaacagc
cgctaccttatgacaggcggtcttggccatgtacgcgtctggaactgcgaaaactcgatt
gtcctgcaagaataccatactccattcaacgtaaactggtgtggcgactggagtccgttc
aatcatcagattgcaatcggttgtgaagaccctgtagcccttctctacgacacttcacgt
caagaaccaattcgtgtcttcacacaacacaacaaaccgattgttgacttaaaattccat
ccgaacagttcacttttggccacatgttcatgtgattgttctatccatctttgggacatg
agagatggaatgagtttgcgccagctcgcagacagaatgaatgttcctagatgcatgcag
ttcacgagaaacggaaagctcttgataagtggagatgactcaggagcaataacttcttgg
gacttggcagaaggaaataaactcggccacataatggcacataacggtcctgtgagggaa
atcgccatatctgttgaaggaacaattgttgcttcagttggacaggaaggagacattttg
ttgtgggatatagagaactttagaacttctgcaatagctcaggcaaagccattgaagaga
ttgcagccaagatacgctgatacaagaagaattaagttctctaatactaatttactgttg
gcacttggttcgcaatgtcctgcaaaggcttaa
DBGET
integrated database retrieval system
