KEGG   Trichomonas vaginalis: 4760906
Entry
4760906           CDS       T01022                                 
Symbol
TVAGG3_0916440
Name
(RefSeq) pre-mRNA 3'-splice site binding
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tva  Trichomonas vaginalis
Pathway
tva03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4760906 (TVAGG3_0916440)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tva03041]
    4760906 (TVAGG3_0916440)
Spliceosome [BR:tva03041]
 Complex A
  U2 snRNP components
   U2 related factors
    4760906 (TVAGG3_0916440)
 Complex B
    4760906 (TVAGG3_0916440)
SSDB
Motif
Pfam: zf-CCCH Torus zf-CCCH_4 zf_CCCH_4 RRM_1 zf-CCCH_2
Other DBs
NCBI-GeneID: 4760906
NCBI-ProteinID: XP_001315287
UniProt: A2EW87
LinkDB
Position
I:complement(2639130..2639927)
AA seq 241 aa
MIDSKDDKEPGMCSIFEKTGCCPKGDRCNKVHFIPAMARTVIFHHIFPNPDFFIQCLPDG
VITMSAQEKQRYIDAFFLDMFLMCRRFGAIEDLLLCSNTMDCLSGNFYVFYEQSDCARMA
LTALDGQYYAGRKVHVTLCSVPRYSTALCKSSMKGECSRGNECAFIHALEPSFALYQEVI
PRINKLFPSAFRKPGDPPVVDNPNEIINGIYRNKNQMADLSKYIPPGFPNHDPAAFKGNN
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atgatagattcgaaagatgataaggagccaggaatgtgctcaattttcgaaaaaaccgga
tgctgcccaaaaggagatcgttgcaataaagtccatttcatcccagcaatggccagaact
gtaattttccatcatattttccctaacccagactttttcattcagtgcttaccagatgga
gttatcacaatgtcagcccaagaaaagcagcgttacatcgatgcatttttccttgatatg
tttttaatgtgcagaaggtttggagccatcgaagatttgctcttgtgctcaaacacgatg
gattgcctaagcggaaatttctatgttttctacgagcaatctgactgtgcaagaatggcg
cttacagctttagatggacaatactacgccggccgtaaagttcacgttacactctgcagt
gttcctagatactctactgctctttgcaagagctctatgaaaggagaatgttccagagga
aacgaatgtgcctttatccacgctttagagccatcgttcgcactctaccaagaagtaatc
ccaagaattaataagttattcccatcagcattcagaaaaccaggtgatccaccagttgtt
gataatccaaacgaaattatcaatggaatttacagaaacaagaaccaaatggccgactta
agcaagtacatcccacctggcttccccaatcatgatccggcagcattcaaaggaaataat
aattaa

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